Shewanella piezotolerans: swp_5063
Help
Entry
swp_5063 CDS
T00791
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00540
Lipopolysaccharide biosynthesis
swp01100
Metabolic pathways
Module
swp_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
swp_5063
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
swp01005
]
swp_5063
Enzymes [BR:
swp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
swp_5063
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
swp_5063
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
swp_5063
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
swp_5063
Lipopolysaccharide biosynthesis proteins [BR:
swp01005
]
Lipid A
swp_5063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
ACJ31677
UniProt:
B8CVK1
LinkDB
All DBs
Position
complement(5283676..5284959)
Genome browser
AA seq
427 aa
AA seq
DB search
MNRSLYSALLYLISPLLMVYLFVRGFKSPDYRLRWNERFGIKRLEQTDLLLHCVSMGETL
AAIPLIKKIQAAYPDLSITVTTTSPTGSREVVRAFSEQVQHCYLPFDLAWCSKHFINQVA
PKYCIIMETELWPNLIHYLKHSGAKVLLANARLSQKSADGYQKRLDLNLPMLQSLDAIAA
QSKQAAARFIDLGVATDNITVCGSLKFDLNIEQTRIDAAQMMRESWNALQRPIWVAGSVH
PGEFDSMILAHQRVLQQYPTALMVLVPRHPEQFDAAVAVVKAAGMQVARRSINDEVTAQT
QVVVGDTMGELLTLYAAADQAFVGGTLIENGGHNPLEPAAVGLPVSVGPHHWDFNEITEL
LQREGALQVVDSSDALAQVLISMFNDKHAYQAASEAGKQVMLQNRGALDKQFALVSSMLK
VKPSEKS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtagcctctattccgctttgctttatcttatctcgccattgctgatggtttat
ttatttgtacgtggttttaagagccctgattatcgtcttagatggaatgaacgctttggt
attaaacgattagagcaaactgatctgttactgcattgtgtttctatgggggaaacctta
gctgctattccactgataaaaaaaattcaagcagcctacccggatctatctatcacagtc
actactaccagccctacgggatcgagagaagtagttcgagcattttcagagcaagtacag
cactgctacctgccattcgatctagcttggtgcagtaaacactttatcaatcaagttgca
cctaaatattgcatcattatggaaactgagctgtggcctaacctaattcactatcttaag
cacagtggcgccaaagtgttgttagcgaatgctagattgtcgcagaaatcagctgatggt
tatcagaaacgcctagatttgaacctaccgatgctacaaagcttagatgcaatagctgct
cagtcgaaacaagctgcggctcgctttatcgaccttggtgttgcgaccgataacataacg
gtatgcggtagcttgaaatttgatctcaatattgagcagacacgcatcgatgctgctcag
atgatgcgagaaagctggaatgcactgcaacgtcctatctgggtggcaggctcggtgcat
cctggtgagttcgactctatgatcctggctcatcaacgggtgctacaacagtatccaaca
gcgttaatggtactcgtaccacgtcaccctgagcagtttgatgcagcggtggctgtggtc
aaagcggcgggaatgcaggtggctaggcgcagtataaatgatgaggtcactgcgcaaact
caagttgtcgttggcgatacgatgggcgagctgctcacgctatatgcagcagcagatcaa
gcatttgttggtggcaccttgatcgaaaatggtggccataatccattagagcccgcagct
gtggggttaccagtatctgttggaccacatcattgggattttaatgagatcactgaatta
ttgcagcgagagggagcattgcaggtcgttgactctagcgatgcgttagctcaggttctc
atttcaatgtttaatgacaagcacgcctatcaggcggcaagtgaagcgggtaagcaagtt
atgttgcaaaatcgaggtgcattagataagcagtttgctctggtgagttcaatgttgaaa
gtgaaacctagcgagaagagctaa
DBGET
integrated database retrieval system
