Sutterella wadsworthensis: I6J16_01105
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Entry
I6J16_01105 CDS
T07195
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sws
Sutterella wadsworthensis
Pathway
sws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J16_01105 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sws03019
]
I6J16_01105 (pnp)
03016 Transfer RNA biogenesis [BR:
sws03016
]
I6J16_01105 (pnp)
Enzymes [BR:
sws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I6J16_01105 (pnp)
Messenger RNA biogenesis [BR:
sws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6J16_01105 (pnp)
Transfer RNA biogenesis [BR:
sws03016
]
Prokaryotic type
tRNA degradation factors
I6J16_01105 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
aRib
DUF5813
LcnG-beta
S1_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QQS90055
LinkDB
All DBs
Position
complement(226661..228784)
Genome browser
AA seq
707 aa
AA seq
DB search
MTMFNKTTQSFRFGDHDVTLETGEIARQATGAVICRMDDTVVLATVVCKKEAKPGQDFFP
LTVDYIEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPDGFFNEVQVIIHVL
SADPAVDPDIPAMLGASAALAVSGIPFRGPIGACRVGYIDDKFVVNPTTEQLKTSRLDLV
VAGTQRAVLMVESEADILPEKTMLDAVVFGHREMQVAINAINELVAQAGKPAWDWQPAPK
NEALIARIVEIADKGLHEAYAIRSKQPRTEKLREVYALVEQTLAADAEAAGTEAPDANEV
NGILFELEAHLVRSQILAGEPRIDGRDTRTVRPIEIRQGVLPRTHGSALFTRGETQALVT
TTLGTKQDEQIIDGLCEEQHDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALKA
VLPSPEEFQYTLRVVSEICESNGSSSMASVCGGCLSMLDAGVPLKDYVAGVAMGLIKEGN
RFAVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIEGITPEIMQAALAQAHDGRQHI
LSRMHEMAGGGAKELSDFAPRMISFKINPEKIRDVIGKGGSVIRALTEETGTTINVEDDG
MVTISSPDMARVAEARRRIEEITAEVEAGQIYEGTVTRLLDFGAIVQLLPGKDGLLHISQ
IANERVNAVSDYLKEGQKVRVKVIEADEKGRVRLSMKALLREEGENK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttcaataagaccactcagagcttccgtttcggcgatcatgacgtgacgctc
gaaaccggtgaaatcgctcgccaggccaccggcgccgttatctgccgcatggatgacacg
gtcgttctcgcgacggtcgtctgcaagaaggaagccaagcccggtcaggacttcttcccg
cttaccgttgactacattgaaaagacctacgcagccggccgcatccccgggggcttcttc
aagcgcgaaggccgtccctccgaaaaggaaacgctgacgagccgtctgatcgaccgtccg
atccgcccgctcttcccggacggattcttcaatgaagtgcaggtcatcattcacgttctc
tcggccgacccggctgttgatccggacattccggccatgctcggcgcatccgccgccctc
gccgtttccggcatccccttccgcggcccgatcggcgcctgccgcgtgggctacatcgac
gacaagttcgtcgtgaatcccacgaccgaacagctcaagacctcgcgccttgatctcgtg
gttgccggcacccagcgcgccgtgctgatggttgagtctgaagccgacatcctcccggaa
aagacgatgctcgacgccgtggtcttcggccaccgcgaaatgcaggtcgccatcaatgcg
atcaacgaactcgttgcccaggccggcaagcccgcctgggattggcagcccgccccgaag
aacgaggcgctcattgcccgtatcgtcgaaatcgccgacaagggtctccacgaagcctat
gccatccgctccaagcagccgcgcactgaaaagctccgcgaggtttatgccctcgtcgag
cagacgctcgctgccgatgctgaagccgccggcacggaagcacccgatgccaatgaagtg
aacggcatcctcttcgaactcgaagcccacctcgtccgctcgcagattctcgccggcgaa
ccccgcatcgacggccgcgacacccgcacggttcgcccgattgaaatccgccagggcgtg
ctcccgcgcacccacggctccgcgctcttcacccgcggtgaaacgcaggctctcgtcacg
accaccctcggcacgaagcaggatgaacagatcattgacggtctttgcgaagaacagcac
gaccgcttcatgctgcactacaacatgcctccgttcgcaaccggtgaaacgggccgcgtc
ggcagccccaagcgccgcgaaatcggccacggccgtctcgctaagcgcgccctgaaggca
gttctgccctcgcccgaagagttccagtacacgcttcgcgttgtttctgaaatctgtgaa
tcgaacggctcctcgtcgatggcctccgtctgcggcggctgcctctcgatgctcgatgcc
ggcgtgccgcttaaggactacgttgccggtgtggccatgggcctcatcaaggaaggcaac
cgcttcgccgtgctcaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcactgaaaacggtgtcacggcgctccagatggacatcaagatcgaaggc
atcacccccgaaatcatgcaggctgcgctcgctcaggctcacgacggccgtcagcacatc
ctcagccgcatgcatgaaatggccggcggcggcgccaaggagctctctgactttgctccg
cgcatgatttccttcaagatcaatccggaaaagatccgtgacgtgatcggcaagggcggc
tccgttatccgcgcccttacggaagaaaccggcacgaccatcaacgtggaagacgacggc
atggtcacgatttcttcgcccgatatggcccgcgttgctgaagcccgccgccgcatcgaa
gaaatcaccgcggaagtggaagccggtcagatctacgaaggcacggttacgcgcctcctc
gacttcggcgccatcgttcagctcctcccgggcaaggacggtctccttcacatcagccag
attgccaacgaacgcgtcaatgctgtttctgactacctcaaggagggtcagaaggtccgc
gtcaaggttatcgaagccgatgaaaagggccgcgtgcgtctttccatgaaggcgcttctg
cgcgaagaaggcgaaaacaagtaa
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