Sutterella wadsworthensis: I6J16_08805
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Entry
I6J16_08805 CDS
T07195
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sws
Sutterella wadsworthensis
Pathway
sws03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I6J16_08805 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sws03400
]
I6J16_08805 (sbcB)
Enzymes [BR:
sws01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
I6J16_08805 (sbcB)
DNA repair and recombination proteins [BR:
sws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I6J16_08805 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J16_08805 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6J16_08805 (sbcB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QQS91018
LinkDB
All DBs
Position
complement(2257203..2258711)
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AA seq
502 aa
AA seq
DB search
MGTQSVEPTFYWYDYETFGVDPRKDRPAQFAGRRTRLDFSPFSGDTGEIFYCRPTEDQLP
NPESCLLTGITPQCCAEKGVCESEFADLIWERLNTPGTVSIGYNTLGFDDEVNRFLFWRN
FLDPYTHSWAKGCSRWDLFPVVCAAWALRGDTIKWPRWEDIDPIKYPKAEGRKGVCFKLE
FLTKANGIEHGHAHDALSDVEATIGLAKLLAEREPKLWRWAFENRTTAKVAAAVSDMKPV
VWVTPKFGIARGCTGIVACFFQEKHDCWMWDLYFDPTVLQSLSYEEIKQRLFPSIKERAQ
SIERLPIRRLKANASPFVCANLKVLSRERAQKYGIDLGVVAANLQKLKTVAPAVQTIFAE
LAAERRTNDAAAPSVDPDRSLYSGFASSGDKARFVQIRSLMPERLAAEAPKFRFDDQKFA
EMLFRFRARNWPEMLSAEETERWKQFCADRVMSGRDGMLQLSDYFDQIDEAQASGLYDDE
RHQQVLEALYDWGETLGNRLSD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccaatctgttgagccaaccttttattggtatgactatgaaacttttggcgtc
gatccgcgcaaggacagaccggcgcaattcgccgggcgacgcacaagacttgatttttcg
cccttttcgggtgataccggtgaaattttctactgtcgcccaacggaagatcagttgcct
aatcctgaaagctgtctgttgaccggcattacgccgcaatgctgtgcagaaaaaggcgtt
tgcgaaagtgaatttgcagatttgatctgggagcggctcaatactcctggaaccgtcagc
attggctacaacacattggggtttgatgacgaagtcaatcgcttcctcttctggcgcaat
tttcttgacccgtacactcatagttgggcaaaaggatgttcccgatgggatctatttcct
gttgtctgtgctgcatgggcgcttcgcggagacaccatcaagtggcctcgttgggaagat
atcgatccaataaagtacccgaaggccgaaggtcgtaaaggcgtgtgcttcaagctggag
tttttgacaaaggccaacgggattgaacatggtcatgcacatgatgcgctttctgacgtc
gaagccacaattggattggcgaaacttttggcggagagggagcctaagctatggcgttgg
gctttcgaaaatcggacgacagccaaagtggcagcagcagtatcggatatgaaacctgtg
gtctgggttacgcctaagtttggtatcgctcggggatgtacggggatcgtagcttgcttc
tttcaagagaagcacgactgttggatgtgggatctctattttgatccgactgtattgcaa
tcgctctcttatgaagaaatcaagcagcggctctttccttcgataaaggagcgagcgcag
agtattgagcggctgccgatccggcgattgaaggcgaatgcttcaccgtttgtttgtgca
aatctcaaagtactctctcgggaacgggcacagaaatacggcattgatctgggcgttgtt
gccgctaatcttcaaaagcttaagactgtggcgccggcggtacagaccatttttgcggaa
ctggctgcagaacggcgcactaacgatgctgcagcgccaagcgtggatcctgatcgatct
ctttattctggatttgcgagcagtggagataaagcgcgatttgttcagatccgcagcttg
atgcctgagcgtctcgctgcggaagctccaaaatttcgttttgacgaccagaagttcgct
gaaatgctcttccgcttccgcgcacggaactggcctgaaatgctctcagccgaagagact
gaacggtggaagcagttctgtgcagatcgggtcatgtcaggacgagacgggatgcttcaa
ctttccgattattttgatcagatcgatgaagcgcaagcaagcggactctatgatgatgaa
agacatcaacaagtgctcgaagcactttacgattggggtgaaacacttgggaaccgtctg
agcgattga
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