Sutterella wadsworthensis: I6J16_09090
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Entry
I6J16_09090 CDS
T07195
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sws
Sutterella wadsworthensis
Brite
KEGG Orthology (KO) [BR:
sws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sws03016
]
I6J16_09090
Enzymes [BR:
sws01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
I6J16_09090
Transfer RNA biogenesis [BR:
sws03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I6J16_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QQS89289
LinkDB
All DBs
Position
complement(2321535..2323559)
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AA seq
674 aa
AA seq
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MYLYFEDDGAFKAGTVLSQAGSAYQVELTTGRRSKIKASHVFFPFETPSASELIARIPEA
AAELDPAFLWEAAPAEEFSFKDLAQEYWGEKPSPVELAALLTVLHANPVYFYRKGRGVYR
KAPAEILSKALEALERKRRMEEQKKAWTAEMVEGKLPEAIGRQALTLLLSPDKNGIEWKA
LSDAAAETRQTPLRLMLALGGIASPWRWHVDSFYTANFPHGRGFPAGLPEPPADTWEELP
IADVDAFSIDDSTTTEVDDAASIEHLEGGITRVGIHIAAPALMIQKDSPLDTVAKTRMST
VYAPGLKTTMLPENWIKASSLDEGHLVPCISLYVWVKDDTFAVERTETRLERIALKANLR
YDKIDDLVTEEAIAADALTIPYAHEIAWLWHFAKRLQHGREEVRGRPEPTGRVDWYFALE
GDGEDAVIHVKGRRRGAPLDLLVAELMIFANSTWGLWLEEHGTPGIYRSQRMGRVRMSTS
PGPHDGLGVERYAWSTSPLRRYVDLVNQRQMIAVLRGETAPYGRTDVDLFTIVSQFEAIY
GLYSDFQTRMERYWSLRWILQEKLTSIEAIVVKGDLVRIDGLPFMQRVPGLTEDLPRGRK
VELRILGCDLVDLVMDARLVKVLDEAITPEEEAALEESLNEASEVAEAAEEVKEAKAAEH
AAQADAAQVLSAPN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatatttcgaagacgacggagccttcaaggcgggaacagtgctttcgcaggct
gggagcgcctatcaggtagagctgactacggggcggcggagcaaaatcaaggcctctcat
gtcttttttccctttgagacaccgagcgcttcagaacttatcgcgcgtattccggaggct
gctgcagagcttgatccggcttttctttgggaagccgcgccggcagaggaattttccttt
aaggatctcgcccaggaatactggggtgagaagccttcgcccgtagagctcgcggcactg
ctgacggtactgcatgccaatccggtttacttctaccgtaaaggccgaggcgtctaccgc
aaagcgccggcggaaatcctctccaaagcgctggaagcgcttgagcgcaagcgccgcatg
gaagagcaaaagaaggcctggacggctgaaatggttgaagggaagctccctgaggcgatc
ggccgtcaggccctgacgcttctgctttcgcccgataagaacggaatcgaatggaaggcg
ctctcggatgctgctgcggaaacgcggcagacgccgctgcgtctgatgctcgcattgggc
ggcattgcttcgccttggcgctggcatgttgacagcttctatacggcgaatttcccgcat
ggccgcggtttccctgccggcctcccggagcccccggctgacacgtgggaggagctcccc
attgccgacgttgacgccttctcgattgacgattcaacgacgacggaagttgacgatgcg
gcgagcatcgagcatcttgagggcggcatcacccgcgtaggcatccacattgccgcaccg
gcgctgatgatccagaaggattcgccgctcgacacggtagccaagacgcgcatgagcacg
gtttatgctccgggtctgaagacgacgatgctgccggaaaactggattaaagcttcgtcg
ctcgatgaagggcacctcgtcccctgcatttcactttatgtgtgggtaaaggacgacaca
tttgccgtcgagcgcactgagacacgtctggagcggatcgcactgaaggcaaatctgcgc
tacgacaaaatcgatgatctggtcaccgaggaagcgattgcggccgatgcactcaccatc
ccgtatgcgcacgaaatcgcttggctgtggcattttgccaaacgtctgcagcacggccgt
gaagaggtgcgcggacgtcccgaaccgacgggacgtgtggattggtattttgcgcttgag
ggcgatggcgaggatgcggttattcacgtcaaaggccgccgccgcggcgcgccgctcgat
ctgctggttgctgaactgatgattttcgccaacagcacttggggcctttggctcgaagag
catggcactccgggcatttatcgttcgcagcgcatggggcgtgtgcgcatgagtacgtca
ccgggaccgcatgatggtttgggtgtggagcgctatgcctggagcacgtcgccgctgcgc
cgttatgtggacctcgtgaatcagcgtcagatgattgcagtgcttcgcggggaaactgcg
ccttatggccgcaccgatgtcgaccttttcacgattgtgagtcagtttgaagcgatttac
ggtctctattccgacttccagactcgaatggagcgttactggtcgctgcgctggattctg
caggaaaaactcacgtccattgaggcgattgtcgtcaagggcgatctcgttcgcatcgac
ggactgcctttcatgcagcgggtgccgggactcaccgaagatcttccgcgcggacgcaaa
gtggagctccgtattctggggtgcgacctcgtcgatcttgtcatggatgcaagactcgtc
aaggtgcttgacgaggcgattacgcccgaagaggaagccgcgcttgaagagtccctcaac
gaagcgtctgaagttgcggaggcagccgaagaggtgaaggaggccaaagcggctgaacat
gccgcacaggccgatgctgctcaagttctgagtgcacccaattaa
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