Sutterella wadsworthensis: I6J16_10175
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Entry
I6J16_10175 CDS
T07195
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sws
Sutterella wadsworthensis
Pathway
sws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J16_10175 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sws03019
]
I6J16_10175 (recQ)
03400 DNA repair and recombination proteins [BR:
sws03400
]
I6J16_10175 (recQ)
Enzymes [BR:
sws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J16_10175 (recQ)
Messenger RNA biogenesis [BR:
sws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6J16_10175 (recQ)
DNA repair and recombination proteins [BR:
sws03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6J16_10175 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
PrmC_N
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQS89474
LinkDB
All DBs
Position
complement(2539399..2541228)
Genome browser
AA seq
609 aa
AA seq
DB search
MHRYSSPKEALKQVFGYDAFRGFQEEVVRAVVRGEDVLVLMPTGGGKSLCYQIPALLRDG
VAVVVSPLIALMQDQVDALEELGVSAAYLNSTLTPEAAADVRRRLRCGELDLLYVAPERL
LMSSMQALLSEVKISLFAIDEAHCVSIWGHDFRPEYGALSILREHFPNVPRIALTATADP
KTREEIVNKLLVHPKEFVASFDRPNIFYRIVDKKNVRSQLAQFIKTEHPGECGVVYCIAR
QTCESICEYLCSKGIHALFYHAGLSNEERAERLAAFQREDDIVMVATIAFGMGIDKPNVR
FVAHADMPKSIEGYFQETGRAGRDGLPSDAWMAYGLADVVNQRYFIDKSGADDLHKQIET
EKLDAMLGLAEACTCRRVQLLAYFGEKSTPCGNCDNCVDPPQMMDATIAAKMIISCIWRI
QQKSNMSFGTLHVIKVLLGESTESTKRHDHEALSTWGIGKELTLEQWRSVMRQLIARHVL
WIDSANHNVVRLGALANNVLRGAMKIEVRRTVMAKAQKQSRFSSPERDEMLAQLSVQERQ
IFEALRVWRRDLAKELGKPPYVLFIDRTLVAIAKLKPACIDDLLGIPGVGRRKVERYADS
ILEIVGNEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgctattcgtcacccaaggaagcgcttaagcaggttttcggttacgacgccttc
cgcggcttccaagaagaagtcgtgcgcgctgtggttcgtggcgaggacgttttagtgttg
atgccgacaggtggcggcaagagtctctgttatcaaatacctgcactattgcgcgacggt
gtggcagtggtggtatcgcccttgattgcgctcatgcaggatcaggtggatgctttggaa
gagcttggcgtcagtgcggcgtacctgaactcgacattgacaccggaagctgctgcggat
gttcgcagaaggctgcgttgcggtgagcttgatctgctttatgttgcgccggaaagacta
ctaatgtcgtctatgcaggctctgctcagcgaagtgaaaatatcgctttttgcgattgat
gaggcgcactgcgtaagcatctgggggcatgattttcggccggaatatggagcgctttct
atattgcgggaacactttcccaatgtgccgagaattgcactcacggcaacagctgatccc
aaaacgcgcgaggaaattgttaacaaacttttagtgcatcccaaagagtttgtggcaagt
tttgatcgaccgaatattttttatcgtatcgttgataaaaaaaatgttcgttcacagctc
gcgcaattcattaagacagagcatccaggggagtgcggcgttgtttactgcattgctcga
caaacatgcgaatccatttgcgaatatctctgcagtaaaggcattcatgcgctcttttac
catgccggtctttcgaatgaggagcgagctgagcgacttgctgcattccaacgcgaagat
gatatcgtgatggtggcgacaattgcttttggtatgggtattgacaaacccaatgtgcgc
tttgttgcgcatgcggatatgccgaaatccattgaaggatattttcaggaaacaggacga
gctggtcgtgatggattgccatccgatgcatggatggcctacgggcttgcggatgtggtt
aatcagcgctatttcattgacaaaagtggcgcggatgaccttcataagcagattgaaacc
gaaaaattggatgcaatgttgggtttagctgaagcctgtacttgccgtcgcgttcaattg
ctagcctattttggtgaaaaaagtacgccttgcggaaactgcgacaactgtgtggatccg
ccacagatgatggatgcaacgattgccgccaaaatgatcatcagctgtatttggcgtatt
cagcaaaaatccaatatgagtttcggcactttgcacgtaatcaaagtccttttaggcgag
agcaccgaaagtacaaaacgtcatgatcatgaagcgctttcaacctggggaattgggaaa
gagctgactcttgaacagtggcgcagtgtcatgcgtcagttaattgcacgccatgttttg
tggattgattcagctaatcacaatgtagtgcgcttaggagcgttggccaacaatgtgctt
cgcggcgcaatgaaaattgaagtgcgccgtacagtaatggcgaaagcacagaaacagtcg
aggttttcgtctcccgaacgtgatgaaatgctcgcacagctttcggtccaggagcgccag
atttttgaggcgctccgtgtttggcggcgtgatctagcgaaggagttgggtaagccgcct
tatgtactcttcattgaccgcacgcttgtggcaatagcaaagttaaaaccagcctgtatt
gacgatctgctaggaatacccggtgtggggcgccgcaaagtcgagcgttatgcagatagc
attctggagatagtcggcaacgaactttaa
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