Sutterella wadsworthensis: I6J16_11105
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Entry
I6J16_11105 CDS
T07195
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sws
Sutterella wadsworthensis
Pathway
sws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J16_11105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sws03019
]
I6J16_11105
03009 Ribosome biogenesis [BR:
sws03009
]
I6J16_11105
Enzymes [BR:
sws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6J16_11105
Messenger RNA biogenesis [BR:
sws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6J16_11105
Ribosome biogenesis [BR:
sws03009
]
Prokaryotic type
rRNA helicases
I6J16_11105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QQS89650
LinkDB
All DBs
Position
complement(2751642..2753456)
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AA seq
604 aa
AA seq
DB search
MADFAELGLSPQLVSSLTALGFEEPTPIQEAAIPAILAGSDVLGQAATGTGKTAAFALPL
IERWALGKEPSDPVILVLTPTRELCLQVSESFHSYGRDAGIIVTPIYGGQEYGRQIRSLK
RGTHVVVATPGRALDHINRGTLKLDAVKAVVLDEADEMLDLGFADELDAIFEALPEGVQT
ALFSATLPPRIAKIADEHLKNPVRIAIAKEETPEGEAPRVPQIAYIVGRNYRTAALGRIL
DLEDPELAIIFARTRNEVDELTEALRVRGYSVEALHGGLDQPTRDRVMRNARSGKIDAIV
ATDVAARGIDLENLTHVINFGIPASYETYVHRIGRTGRAGRTGTAITILEPREHRHIRAL
ERATRSKIEIRTVPSATDVQAKRLEVTRGAIAEILAQGGLERYNVIVEALCEEHDPIEVA
AAAVRLALESEGTNDDDMEIPAFGDRCDRRERSERPERPERPRRERGEPEEGMTRLFIGA
GRMSGVRPGDIVGAIANEANVSSRQIGAIDISDRFTLAEVDSAVAQQVIDALQGVRFKGR
PITVKLDQGAPREERGDRGRSDRFEREGRNDRYDRPERKRFDRDDRSERYSRFDDDNRRR
GPRR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcgccgaactgggcctttcgccccaactcgtctcttcccttactgccctt
ggctttgaagaacctacccctattcaagaggctgccattccagccattcttgcgggctca
gacgttctcggccaggccgccactggcacgggtaaaactgccgccttcgcacttcctctt
attgaacgctgggcacttggcaaagagccttccgacccggtgattctcgttctcactccg
acgcgtgaactatgcctgcaggtgagtgaatcttttcacagctacggccgagatgccggc
atcatcgtgacgccgatctacggcggacaggaatatggccgacagatccgctcgcttaag
cgcggcacgcatgtcgttgttgccacgccaggtcgagcccttgatcacattaatcgcggc
acgctcaagcttgatgccgtaaaggccgtagttctcgacgaagctgacgagatgcttgac
ctcggctttgccgacgaactggatgccatcttcgaggcactccccgagggcgtacagaca
gcactcttctccgctacgcttccgccgagaattgcgaaaatcgccgacgaacatctgaag
aaccccgtgcgaatcgctattgccaaggaagaaacacccgaaggcgaagccccccgtgtt
cctcagatcgcttatatcgtgggacgcaattaccgcacggcagcgcttggacgcattctt
gatcttgaggatcccgaacttgccatcatcttcgcccgcacccgcaacgaagtcgatgag
ctgactgaagcacttcgcgtccgcggctacagcgtcgaggcattgcacggcggccttgat
cagcccactcgtgaccgcgttatgcgtaatgccagatccggcaagattgatgcgattgtc
gccaccgacgttgccgctcgcggcatcgatttggaaaacctgacgcacgtcatcaatttc
ggtatcccggcgtcctatgaaacctacgtgcatcgcatcggccgaacgggccgtgcaggc
cgcactggtacagccatcaccattcttgaaccgcgcgaacaccgccacattcgagccctc
gagcgcgctacacgctcaaaaattgaaatccgtacggtcccgtcagctaccgatgttcaa
gccaagcgccttgaagttacccgcggtgcaatcgcagagatcctcgctcaaggaggactt
gaacgctacaacgtaatcgttgaggcactctgcgaagaacacgacccgattgaagtggcc
gctgccgccgttcgcctcgcactggaaagcgaaggtacaaatgacgacgacatggagatc
cccgctttcggtgatcggtgcgatcgacgcgaacgcagcgaacgtccggaacgtccggaa
cgtccgcgccgcgaacgcggagagcccgaagagggcatgacgcgtctctttatcggagcc
ggccgcatgagcggcgtgcgcccgggcgatatcgtcggtgccattgccaatgaggccaat
gtaagctcgcggcaaatcggagcaattgatatttccgaccgctttacgctcgcagaagtc
gacagcgcagtcgcgcagcaagtcatcgacgcccttcagggggttcgcttcaaaggacgc
cccatcacggtgaagctcgaccaaggtgcgccgcgagaagaacgcggtgatcgaggccgt
tccgatcgttttgagcgcgaaggacgaaacgatcgctatgatcgtcccgaacgtaagcgc
tttgatcgtgacgaccgttctgagcgttattcacgctttgacgatgacaaccgccgtcgc
ggaccgcgccgctga
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