Sphingosinicella wutangchuni: SH591_05750
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Entry
SH591_05750 CDS
T11839
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
swu Sphingosinicella wutangchuni
Pathway
swu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
swu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SH591_05750 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swu03400
]
SH591_05750 (uvrB)
DNA repair and recombination proteins [BR:
swu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SH591_05750 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SH591_05750 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
SWI2_SNF2
AAA_16
T2SSE
AAA_7
AAA_22
Microtub_bd
DUF87
AAA_33
nSTAND3
FATC
DUF2963
Motif
Other DBs
NCBI-ProteinID:
WRP29683
LinkDB
All DBs
Position
complement(1125778..1127985)
Genome browser
AA seq
735 aa
AA seq
DB search
MPIAIRTGLEEPETGKDFVPHRPQRPEKSEGGKAFKLVSEYQPAGDQPTAIAELTEQILQ
GEQTQVLLGVTGSGKTFTMAQVIEKLQRPALILAPNKILAAQLYGEFKSFFPDNAVEYFV
SYYDYYQPEAYVARSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIGS
VETYSAMVFSLKKGETVDQREIIRKLVALQYKRNDQAFARGNFRVRGDNLEIFPSHYEDT
AWRINFFGDEIEEIVEFDPLTGKKIASLESVKVYANSHHVTPGPTLKQAMEAIKHELAER
LKELVSEGKLLEAQRLEQRTHFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTIPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQSV
AVSATPGTWEMEQTGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLIHEAKETARKGYRTL
VTTLTKRMAEDLTEFLHEAGLRVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVEGKVILYADRMTGSMERALRETDR
RRERQREYNEAHGITPTTIKRNISDLLADVSQRDSVIIDTGDDDRPHLVGHNLRAYIEDL
ESRMRKAAADLEFEEAGRLRDEIRRLEADELGIPDHEKKAPVAGHSISGRPGTRTTRFGK
QKAARAEKRARGGGR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgccattcgcaccggtctggaagagcccgagaccggcaaagatttcgtcccg
caccgcccccagcgtccggagaagtccgagggcgggaaggcgttcaagctcgtctcggaa
tatcagccggcgggcgaccagccgacggcgatcgccgagctcaccgagcagatcctgcag
ggcgagcagacccaggtgctgctcggggtgaccggatcgggcaagacattcaccatggcc
caggtgatcgagaagctgcagcggccggccttgattctcgcgcccaacaagatcctcgcg
gcgcagctctacggcgagttcaagagcttcttcccggacaatgcggtcgaatatttcgtc
agctattacgattattaccagcccgaagcctatgtcgcccggtccgacacctacatcgag
aaggaaagctcggtgaacgaggcgatcgaccggatgcgccactcggcgacccgggcgctc
ctggagcgcgacgacgtcatcatcgtcgcctcggtctcgtgcctctacggcatcggttcg
gtcgagacctattcggcgatggtcttcagtctcaagaagggcgagacggtcgaccagcgc
gagatcatccgcaagctcgtcgcgctccaatataagcgcaacgaccaggcgttcgcgcgc
ggcaatttccgcgtccgcggcgacaatctcgaaatcttcccgtcccactatgaagacacc
gcctggcggatcaatttcttcggcgacgagatcgaggagatcgtcgagttcgatccgctc
accggcaagaagatcgccagcctcgaatccgtgaaggtctacgccaattcgcaccacgtc
acgcccgggccgacgctcaagcaggcgatggaggcgatcaagcacgagctggccgagcgg
ctgaaggagctggtgagcgagggcaagttgctggaggcgcagcggctcgagcagcgcacc
catttcgacctcgagatgatcgcggcgaccggctcctgcgccggcatcgagaattacagc
cgattcctgaccgggcgcctgcccggcgagccgccgccgaccttgttcgaatatttgccc
gaaaacgcgcttttgttcgtcgacgagagccaccagacgattccgcagatcggcgcgatg
gcgcgcggcgatcaccgccgcaagatcacgctcgccgaatatggcttccgcctgccttcg
tgcatcgacaaccgtccgctgcgcttcaacgaatgggatgcgatgcgcccgcaatcggtc
gcggtctcggccacgcccggcacgtgggagatggagcagaccggcggcgtcttctccgaa
caggtcatccgccccaccggcctgatcgacccgccggtcgagatcaagccggtcgaggac
caggtcgacgacctcatccacgaggccaaggagacggcgcgcaaaggctatcgcacgctc
gtcaccacgctcaccaagcgcatggccgaggatctcaccgaattcctccacgaggccggg
cttcgcgtccgctacatgcactccgacgtcgagacgctggagcgcatcgagctgatccgc
gacctgcggctcggcgtgtacgacgtgctggtcggcatcaacctgctgcgtgagggacta
gacatccccgaatgcggactggtcgcgatcctcgacgcggacaaggagggcttcctgcgc
tccgaaacgtcgctgatccagacgatcggccgcgccgcccgcaacgtcgaaggcaaggtc
atcctctatgccgaccgcatgacgggatcgatggagcgcgcgctacgcgaaaccgatcgc
cgccgcgagcgccagagggaatataacgaggcgcacggcatcacgccgaccacgatcaag
cgcaacatttccgacctgctcgccgacgtttcgcagcgcgacagcgtcatcatcgatacc
ggcgacgacgacaggccgcacctcgtcggccacaatctgcgcgcctatatcgaggatctg
gaaagccggatgcgcaaggccgccgccgatctcgaattcgaggaagccgggcgcctgcgc
gacgagattcgccggctcgaggccgacgaactcggcattcccgatcacgagaagaaagcg
ccggtcgcgggtcattcgatcagcggccgccccggcacgcgcacgacccgcttcggcaag
cagaaggcggcgcgggcggagaaacgggcgcgcggcgggggccgctga
DBGET
integrated database retrieval system
