Sphingomonas xanthus: FMM02_00345
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Entry
FMM02_00345 CDS
T07168
Name
(GenBank) PAS domain S-box protein
Organism
sxa
Sphingomonas xanthus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_3
PAS_9
PAS
Response_reg
GAF_2
HATPase_c
PAS_8
HisKA
GAF_3
HPTransfase
Motif
Other DBs
NCBI-ProteinID:
QDP18544
UniProt:
A0A516IP36
LinkDB
All DBs
Position
70568..74731
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AA seq
1387 aa
AA seq
DB search
MSNLEFLPAEGEMAGRVRNFDWSKTPLGAIDSWPQSLKTATAILLNSPVPIVMLWGEDGV
MIYNDAYSVFASARHPGLLGSKVREGWPEVADFNDNVMKVCLAGGTLAYKDQELTLHRHG
RPEQVWMNLDYSPVPDETGRPAGVIAIVVETTERVLAERQTVAERERLKQMFEQAPGFMA
VLRGPEHVFELANPAYMQLLGHREVIGKAAREAVPEVADQGFFEILDDVYRTGKAFIGSA
VDVGLQRTPDGPTEHRVVDFVFQPITDNQGQVSGIFIEGSDVTERARADALRAAQSQMLE
LAVRDAPLDQLLDTLLRTVEAQSPFGMLGSVLLLEPDGIHLRHGAAPSLPDAYNQAIDGI
EIGPEVGSCGTAAFHKTPVYVADIATDPLWTEFSDLALAHDLRACWSTPILSGQGEVLGT
FAMYYREPREPMPADLEVIEIVTRSAALVIERTIAEQALQESEARLREKAAEFQMLAENV
SQLAWMAEADGSIFWYNKRWYDYTGTDFESMQGWGWREVHHPDHIDRVIEEVQRNWAAGE
PWEGTYLLRSASGEYRWFLTRAEPIRNEDGELIRWFGTNTDISAQQKAETALRESEERLR
LVLDAAAGAFYSVDREGKTTLVSNGFLTMMGFSSEEEVIGRKLHDLIHHTHPDGSHYAVE
QCPIYRCASTGESAHISDELFYRLDGSPVPVEYWVSPFMRDGEHIGAICTILDVTERKRS
EAALRETEERYRLASRATNDAIWDWDLVRDHVQWNEAVHTMFGYSEDGVEPTGTWWLEHI
HPEDRERVEESIHAVIDGGDSHWTEEYRFLTSDGGHVHVLDRGFVLRDAQGRAVRMIGAM
LDLTERRRAEEALRELNETLERRVAEVIAEREQAEEALRQSQKMEAVGQLTGGIAHDFNN
LLTIITGNVDMARRSLAGGEKARAGRALDNAQKGADRAAALTQRLLAFSRRQPLEPKPIN
VDKLVTGMAELLHRSLGETVKLETVSNPGLWLVEVDPNQLESAILNLAVNARDAMPGGGR
LTIETANAYLDEEYSSAHAEVTSGSYVVIAVSDTGHGMSKKTLAQVFDPFFTTKEVGKGT
GLGLSMVYGFVKQSGGHVTVYSEEGQGTTIKIYLPRLMSGKEAELAPSSLEADLPSREHT
ILVVEDDDDVRAYSVEILRELGYRVLEAHDGPSALRLIERQDTQIDLLFTDVVMPTMSGR
ELADLARSHQRNLKVLYTSGYTRNAIVHGGRLDLGVEMIAKPFTYQGLARKIRDVLDAGK
TGRVLVVEADSTARMFAIEVLDDAGYAIDEAANASEALNRVRAAQGRYDAIILDVALPEK
RGDALAVELRANYADLPILLVCGEHAAELRARFAEDKCIGVAGKPYTAAKLQQALSALGV
SCVSRKS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccttgagttcctgccagccgaaggtgaaatggcgggccgtgtccgaaatttt
gactggtccaaaacgccgctcggtgcgatcgacagctggccacaaagcctcaagacggcc
accgccattcttctcaattcgccggtcccgatcgtgatgttgtggggcgaggacggcgtc
atgatctacaacgacgcttattccgtattcgcgagcgcccgccatcccggattgctaggc
agcaaggtgcgcgagggttggccggaagtcgccgatttcaacgacaatgtcatgaaagtc
tgtcttgccggaggtacgctcgcgtataaggatcaggagcttaccctccatcgccatggc
cggcctgaacaggtctggatgaacctcgattattcgccggtacccgacgagaccggaagg
cccgccggtgtcatcgcgatcgtcgtggaaacaaccgagcgggtgctcgccgaacgtcaa
acggtcgccgagcgcgagcgacttaaacaaatgttcgagcaggccccgggctttatggct
gtcctgcgcggtcctgagcatgtgttcgaattggccaacccggcctacatgcaattgctg
ggtcatcgcgaggtgatcggcaaggcggcccgcgaggcagtaccggaagtagccgaccag
ggctttttcgagattctcgacgacgtttatcgcaccggcaaggcattcatcggaagcgct
gtggatgtcggccttcagcgcaccccggacggtccgaccgaacatcgcgtcgtggacttc
gttttccagccgatcactgacaatcagggccaggtcagcggcattttcatcgaaggctcg
gacgtgaccgagcgggctcgcgccgacgccttgcgggctgcgcaaagccagatgctcgaa
ctggcggtaagggacgcaccactcgaccagctgctcgacacgctccttcgcaccgtcgaa
gcacagtccccatttggaatgctcggctccgttttgctgctcgaaccagatggaatccac
ctgaggcacggggcggcgccgagcctgccggatgcttataatcaggcgatcgatgggatc
gagatcgggcccgaggtgggctcgtgcggtaccgccgcatttcataagacgcccgtctat
gtggccgatatcgccaccgatccattatggacggaattcagtgatttagcgttggcgcac
gacctcagagcctgctggtcgacaccaatattgtcaggtcaaggcgaggtcctcggcacc
ttcgccatgtactaccgcgagccgcgcgagccgatgcccgctgacctggaggtgattgaa
atcgtgacgcgttcggcggcgctcgtcatcgagcgcacgatcgccgagcaagcacttcag
gaaagcgaagcccgtctgcgagagaaggccgccgagttccagatgctcgcggagaatgtc
agccagctcgcctggatggccgaagccgacggatcgatcttttggtacaacaagcgctgg
tacgactacacgggcaccgattttgaatcgatgcagggctggggctggcgcgaggttcat
caccctgatcacatcgatcgggtaatcgaggaagtgcagcggaactgggcggccggcgaa
ccatgggagggcacgtatctgctgcgctctgcctcgggggagtatcgctggttcctcact
cgagccgagccgatccgaaatgaggacggcgagctaatccgctggtttggtaccaacacc
gatatcagcgctcagcagaaggcggaaacggcgttacgcgaaagcgaggaacgtctgcgc
ctcgtcctggatgcagcggccggcgctttctactcggtcgaccgcgagggcaagaccacg
ctggtcagcaacgggtttctgaccatgatgggcttctcgagcgaagaagaagtgatcggt
cggaaacttcacgaccttattcatcacacccatcccgacgggtcgcactatgcggtcgag
caatgccccatttaccgatgcgcaagcaccggcgagtctgcccacatctctgacgaactg
ttctatcggctcgacgggtcacccgtgcccgttgaatactgggtctcgccgttcatgcgt
gacggcgagcatattggcgccatctgcacgatcctggatgttaccgagcgcaagcgttcc
gaggcggctctgcgtgaaaccgaagaacgctaccgcctcgcatcacgcgcaaccaacgac
gccatctgggactgggacctcgtccgagatcacgtacagtggaatgaagccgtgcatacg
atgttcggctattccgaagacggggtggaaccgactggcacttggtggcttgagcacatc
cacccggaagaccgggagcgcgtggaggagagcatccacgctgtcatcgatgggggcgac
agccactggacggaggaataccgtttcctgacgagcgatggtgggcatgttcatgtcctc
gaccgcggattcgtgttgcgtgacgcgcagggccgggcagtccggatgatcggcgcgatg
cttgatctgacagagcgccggcgcgccgaagaagcgctgcgtgaactcaacgagacactt
gagcggcgggtcgccgaggtaatcgcggagcgcgaacaggccgaagaggctctacgccaa
tcgcagaagatggaagcggtaggtcagcttaccgggggcatcgcccatgacttcaacaat
ttgcttacgatcataactggaaacgtcgacatggcacgccggagcttggcgggcggggag
aaggcccgtgccggaagagcgctggacaatgcccagaagggcgcagaccgtgctgcggca
ttgacccagcggctacttgccttctcgcggcggcagcccctcgagccaaagccgatcaat
gtcgacaagctcgtcaccggcatggcagagttgctacatcgctcactgggcgaaacggtg
aagcttgagacggtttccaatcctgggctctggttggtcgaagtggatcccaaccagctg
gaaagcgcgatcctgaatctcgcggtaaatgcacgcgatgcaatgccgggcgggggcagg
ctgacaatcgaaaccgccaacgcgtatctcgacgaggaatattcatccgctcatgcggaa
gtgacgtccggatcctacgtggtgattgctgtctccgatactggccatggcatgtcgaag
aagacactggcacaggtgttcgacccattcttcactaccaaggaagtcggcaaggggacc
ggcctcggcctctcgatggtgtacggtttcgtaaaacagtcgggcggccacgtgaccgtc
tattcggaagaaggccagggcacgaccatcaagatttacctgccacgcctgatgagcggc
aaagaagctgaattagcgccctccagtcttgaggctgatcttccaagtcgtgagcacaca
atcctcgttgtcgaggatgacgacgacgtgcgggcctactcggtcgagatcctgcgcgaa
ctcggatatcgggttttggaagcgcatgatggaccatcggcgctacgcttgatcgagcgc
caggatacccaaatcgatcttctcttcaccgacgtggttatgccgacgatgtccggacgg
gagctcgccgacctggcccgctcgcatcagcggaatctgaaggtgctctacacgtccggc
tacactcgaaatgcgatcgtacacggcgggcgcctcgaccttggcgtggaaatgatcgcc
aagccatttacctatcaggggcttgctcggaagatcagggatgtcctcgatgccggcaag
actggccgtgtgcttgtggtggaagcagattcaacggcgcgcatgttcgccatcgaagtg
ctggacgacgcgggttatgccatcgacgaggcggcgaatgcatccgaggcgcttaaccgg
gtacgcgccgcgcaagggcgatacgacgcaataattctcgacgtcgctttgccagagaaa
agaggagatgcgttggctgttgagcttcgcgccaactacgccgaccttccgatcctgctt
gtctgcggcgagcacgcggcagagctgcgcgcgcgcttcgccgaggacaagtgtataggc
gtggcaggcaagccgtacaccgcagcaaagcttcaacaggcgctcagcgcactgggcgta
agttgcgtcagcagaaagtcttaa
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