Sphingomonas xanthus: FMM02_00520
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Entry
FMM02_00520 CDS
T07168
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sxa03009
]
FMM02_00520
Enzymes [BR:
sxa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FMM02_00520
Ribosome biogenesis [BR:
sxa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FMM02_00520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Motif
Other DBs
NCBI-ProteinID:
QDP18575
UniProt:
A0A516INT0
LinkDB
All DBs
Position
111192..112376
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AA seq
394 aa
AA seq
DB search
MSREIVRIAARGDGVTADGSHVAFAVPGDLLLDDGTLQRGPGHQLPPCRHFPACGGCQLQ
HLTDTAYADYCTSRIAGALAQHGLEAELHAAHISPPRSRRRATLRALKAGGRVLIGFNEA
GSNRIVDMQECHILEPRLFALLAPLRVLLGRFLPQRRTAEVQMTLADQGVDLLLKGVEVE
GLDAVEAVAAFSEAQRLARLSIDEGLGAEPRYEPRPVTVDLGGIPVALPVGAFLQATADG
EAALLGGALEAVGGVARVADLFAGLGTFALGIPETAIAAEASREAVLSLKTAAARAGRVL
EVQHRDLYRRPLDRAELAGVDAVLLDPPRAGAQEQIRELAASSVARIAYVSCNPSTFARD
AALLVGGGYRLEWVRPVGQFRWSTHVELVAAFSR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggagatagtccggatcgcggcacgcggcgatggcgtgaccgctgacggcagt
catgtcgcctttgccgtgccgggcgacctgctgctcgatgatggaacattgcagcgtggg
ccggggcatcagctgccgccatgccgccatttcccggcttgcggaggctgtcagctccag
cacctgactgacaccgcctacgccgactattgcacctctcgaattgccggtgccttggcc
cagcacggcctggaggccgaacttcatgcggctcatatttccccgccgcgaagccgccgc
cgggcgacgctgagggcattgaaggcaggcggaagggtgctgatcggtttcaatgaagct
ggcagcaaccgcattgtcgacatgcaggagtgtcacatcctcgagccccgcctgtttgcg
ctgctcgctccgctgcgggtcctcctcggccgcttcctgccgcagcgtcgtacggcggaa
gtccagatgacgctggccgatcaaggcgtcgacctcttgctaaagggtgtcgaggtcgag
gggctggacgcggtcgaggcagtggcggcgttcagcgaagcgcagcggctggcccggctc
agcatcgacgagggcctcggggccgaaccgcgttacgagccgcgaccggtcacggtggat
ttgggcggcatcccggtcgccctcccggttggcgccttcctgcaggcaaccgcagacggg
gaagcagctttgttgggcggagcactggaggcggtgggaggcgtggccagggtcgccgat
ctcttcgctggcctggggacgttcgccttgggcatcccggaaacggcgatcgccgccgaa
gcgtcgagggaggccgtgctgtcgcttaagaccgccgcggcaagggcagggcgcgtgctc
gaggtccagcatcgcgatctctacaggcggcccctggaccgggcggaactggcgggagtc
gacgcagtgctgctcgatccgccccgtgcgggtgcccaggagcagatccgtgagcttgcg
gcatcgtcagttgccaggatcgcctatgtcagctgcaacccctcgacattcgcgcgcgat
gcggcgctgctggtcggcggcggttatcggctggagtgggtgcgcccggtcggtcagttc
cgctggtccacccacgtcgaactggtcgccgcgttcagccgctag
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