Sphingomonas xanthus: FMM02_01425
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Entry
FMM02_01425 CDS
T07168
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_01425 (addA)
Enzymes [BR:
sxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FMM02_01425 (addA)
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FMM02_01425 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QDP20472
UniProt:
A0A516IUB5
LinkDB
All DBs
Position
complement(302607..305993)
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AA seq
1128 aa
AA seq
DB search
MPRLQGAQAQASDPSAHAALSASAGTGKTHVLASRVIRLLLRGVPPSSILCLTFTKAGAA
EMANRVGERLAHWVRLPDADLAAELAALHEEFGERHVRQARRLFAQVLESPGGGLRIQTI
HSFAQALLAAFPAEADIAPGFRPIEGRAEEELARRTLAALLEQAERDGDENLGADISALT
LRLGEEGAERYLMACARAPEAMAALGEAADIETRLNLIIGIEDGNANAEIVRRLTDGAID
HGLFARLGDANRRWGRDSGLKIAAHLDAFLDASPDARADMLDSVGSGLVTAAGEPCKARA
GQIKADPGYQQWVDQFTDWLVGLRTLVAAANFASIQAAGLRAGQAFAAAYTRAKRAAGVA
DFNDLIRWTRHLFAQAGMGEWVRYKLDQRTDHVLVDEAQDTNADQWAIVDALAGEFFSGS
SEGEGRQRSLFMVGDYKQAIFGFQGTNPREYENFRGRIADKAEAAMRAAIESQVEAREFR
NLSIEASFRSSPPVLDVVDAVIAEVGFAEMGLPEPPNLHAAHHRSRPGCVELWAPFGAEG
DQSDLDSGEEAWINEPARLYADALARQVGKWLAEAPPVASTGRPLCAGDILILVRSRGEL
ASLIVARLYAHGVPVAGIDRLHLHKPLAVRDLLSTIKFAVQPLDDLNLAGLLVSPLIGWD
QDQLYELAQGRSGKLWPELATKRERYPHWQQAHAILSEWLAMAEYVPPALFLETILSGPL
QGRSKLIRRLGEAARDPIEELVSSAMMFEREEIASLDAFLAWFGQGEVEVKRDPAAPVNA
VRVMTVHGAKGLEAPLVVLADATHDPDKVGGVSSMMTMEVPGAGPVPLLRPRKAERSPLF
HDLVEAAKRSDAEEHWRLAYVGLTRSAERLVVAGVKPSRGVPPRSWHAATARAMAGLGAA
SFHLEGWGDGLRWEGAAAPAVSTRRRREPIPPIAVPDLLRCDAPDEERPSRPLAPSQLAE
DKEAMPPPSPAMRFAAERGNLLHALFERLPATLGADRRELALRWLGQRGVEGETALEIVE
AACSLIDDPRFASLFGPGSLGEAPIAATLADGRVVAGTVDRLCIGEEVVRVIDFKTGRAV
PRDEADIPQGHRLQMDAYAQALAVIFPGRRIEASLLYTSGPRLFKLTG
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgccaagattgcagggcgcccaggcccaggcgtcggatccctccgcccatgctgcgctg
tccgcttcggctggaaccggcaagacgcatgtgctggcgtcgcgggtgatccgattgttg
ctgcgcggcgtgccgccatcgtcgatcctgtgcctgaccttcaccaaggccggggccgca
gaaatggccaaccgcgtgggcgagcggcttgcccattgggtgcgattgccggacgccgat
ctggccgcggagctcgccgcgctccacgaggaatttggcgagcgccatgtcaggcaggcg
cggcggctgttcgcgcaggtgctggagtcgccgggcggtggccttcgcattcagacgatt
catagttttgcgcaggcgcttctcgcggcttttcccgccgaagccgacatcgcccccggt
tttcgcccgatcgaggggcgcgcagaggaagaactggctcgcaggacgctggcggcattg
ctcgaacaggccgagcgggacggtgatgaaaatctcggcgctgacatctccgcgctcacc
ctgcgcctgggcgaggaaggagcggagcgctacctgatggcctgtgcccgcgctcccgag
gcgatggccgcgctgggggaagcggcggacatcgagacgcgcctgaacctgatcatcggg
atcgaggatggaaacgccaacgccgagatcgtgcggcggctgaccgacggggcgatcgat
catggcctattcgcgcggctgggcgatgccaatcgccgctgggggcgcgattcgggcctg
aagatcgcggcccacttggacgcgtttctcgatgcctcgcctgatgcgcgggccgacatg
ctggacagcgtcggatccggcctagttaccgccgccggcgaaccgtgcaaggcaagggcc
ggacagatcaaggctgaccccggctatcagcagtgggtcgaccagttcaccgattggctg
gttggtcttcgcaccttggtcgccgctgcgaatttcgcgagcatccaggccgcaggactt
cgcgcgggacaggctttcgcggctgcctatacgcgcgcaaagcgcgccgccggcgtcgcc
gacttcaacgacctgatccgctggacccgccacctgttcgcccaggcagggatgggcgaa
tgggtacgctacaagctcgatcagcgcaccgatcatgtgctggtcgacgaagcgcaggat
accaatgccgaccaatgggcgatcgttgacgcgctcgccggggagttcttcagcggctcc
tccgaaggcgaagggcgacagcgcagcctgtttatggtcggagattacaagcaggcaatc
ttcggcttccagggcaccaatccccgcgaatatgagaacttccgagggcggatcgcggac
aaggccgaagcggcgatgcgcgccgcaatcgagtcccaggtggaagcccgcgaattccgc
aacctgtcgatcgaggccagttttcgcagttcgccaccggtgctggacgtggtcgacgcg
gtcatcgccgaggtcggtttcgccgagatgggactacccgaaccacccaatctgcacgcg
gcgcaccatcggtcacggccgggctgcgtggaactgtgggcgccgttcggcgccgagggc
gaccagtccgacctggactccggggaagaggcctggataaacgagccggctcgactctac
gcagatgcgctcgcgcggcaggtcgggaagtggctggccgaggcgccgcccgtagcgtcc
accgggcgaccgctgtgcgcgggggacatattaatcctcgtccgcagccgcggggagctg
gcgtcgctgatcgtcgcccggctctacgcccatggcgttcccgtcgcgggtatcgaccgg
cttcatcttcacaaaccgctggcggtgagggacctgctctcgacgatcaaattcgccgtc
cagccgctcgatgacctcaatcttgcaggtttgctggtttcgccgctgatcggctgggat
caggaccagctctacgagcttgcccaagggcgcagcggcaagctgtggccggagcttgcg
acgaagcgcgagcgctatccccattggcagcaggcccacgcgatcctttccgaatggctg
gcgatggcggaatatgtgccgcccgcgcttttcctcgaaacgatcctgtccggcccgctg
caagggcgaagcaagctgatccgccgacttggggaggcagctcgcgacccgatcgaggag
ctggtgagcagcgcgatgatgttcgagcgcgaggaaatagcctcgctcgacgctttcttg
gcctggtttgggcagggcgaggtcgaagtgaagcgtgatcctgcagcgccggtcaacgcc
gttcgcgtgatgaccgtccacggcgccaagggtctcgaggctccgctggtggtgctggct
gatgcgactcacgacccggacaaggttggcggcgtatcatcgatgatgacgatggaggtc
ccgggagctggcccggtgcccttgcttagaccgcgcaaggccgagcgatcgccgctgttc
catgaccttgttgaggccgcaaaacggagcgatgccgaggaacattggcgacttgcctat
gtcgggctgacccgctccgccgagcggctggtcgtcgccggggtcaagccgagccgcggc
gtcccgccgaggagctggcatgccgctacggcgcgcgcgatggctgggcttggcgccgcc
agcttccacctcgaaggctggggcgacgggttgcgctgggaaggcgctgccgcgcccgct
gtcagcacgcggcgccgaagggagccgatcccgccaatcgcggtccccgacctgcttcgc
tgcgacgcgcccgacgaggagcggccgtcgcgcccgctcgcgccgtcgcaactcgccgag
gacaaggaggccatgccaccgccgtcgccggcgatgcgttttgccgctgagcgcggcaac
ctgctgcatgcattgttcgagcggttgcccgcgactctgggtgccgatcggcgcgagctt
gcccttcgctggctcggccagcggggtgtggagggcgaaaccgcgctggagatcgtagag
gccgcctgttcgttgatcgatgatccgcggttcgccagcctgttcggcccgggttccctc
ggcgaagcaccgattgccgcgacacttgccgatgggcgggtggttgccgggacggtcgac
cgcctgtgtatcggcgaagaagtggtccgggtgatcgacttcaagaccgggcgcgcggtg
ccacgggatgaagcggatattccgcaagggcatcggctgcaaatggacgcttatgcccag
gccctagcggtgatcttccccggcaggcggatcgaagcctcgctgctctatacctccggt
ccgaggctgttcaagctgaccggttga
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