Sphingomonas xanthus: FMM02_01430
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Entry
FMM02_01430 CDS
T07168
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_01430 (addB)
Enzymes [BR:
sxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FMM02_01430 (addB)
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FMM02_01430 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDP18736
UniProt:
A0A516IPG6
LinkDB
All DBs
Position
complement(306261..309176)
Genome browser
AA seq
971 aa
AA seq
DB search
MADGGLFDRRTPGEPLAYSIPAHRSFADALVNGLLKALGRDAQVLASGRILLPNNRAVRT
VTEAFVRASGGGLVLPRLLAIGDPELGERSGGALDPLDFADEIAPAIEPLERQLLLARLL
RAEGEGAAEAMRLAAEVARTMDALAIEEVPAAALTDAVAGNDELAAHWLKAIARFRLLLE
RWPSLMAERSLMSLAERRGLQFRSLARRWRERGPAGFTIAAGVTTAAPAVAELLAQVSRL
PEGAVILPALADQRSMPDEQWDQLGPDEEGRSAPTHPQFHLKQLLARIGINRAEVRPWIG
AGRASSTSARGRAVIQAMASPRFTDRWVALPPAERRLTGIRIAEFPDPASEAQGIAIALR
EALERPGKTAALVTPDRQLASRVSAHLKRWGIEADDSAGQPLSATPAGTLLLATAAAVVE
RFSPVRLLAMLKHPRVGGEGEHRRRWLDDVRAIDLGLRGPRPNAGIKGLDEHFAEAHEVP
RAAWHRIRPAVEALDRPVGTLDLVALAALLRESVHSLAGDQAWSGPDGRAAAELLGGLER
SSDGAKIGVAPGDVLPLLGQLMDGVIVRRPYGGHPRIFIWGLLEARLQQADLMVLGGMNE
GVWPSLPPPDPWLAPQIRQTLGLPGLEFRTGLAAHDFMSALGAPRVLLTRSRRDSRSPTI
ASRLWLRLQAMTGGMTRDQRLERLAQALDASDKVEPAGRPAPRPPIEVRPRRIAVTDLDR
LKADPFAFYAKAILDLRALDPVDAEHHAAWKGTAVHTVLESWFKGDGCDPERLAGRAQAM
IADERIHPMLRALWSPRLMESIEWIAAETASDLAAGRTPVLAEEKGEAEVAGILLYGKVD
RIDRLGDGRLAIVDYKTGQAPKPKAVAEGFALQLGLLSLIARGGGFGAVKGEAGAHEYWS
LAKKNGKFGYRQSPDDGDPSAFVDSAYRHFAATVSAYLLGSEPFTAKLDPAYAPYEDYDQ
LMRLEEWYGRD
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggcgggctgttcgaccgcaggactcccggcgagccgctcgcctattccatt
cctgcccaccgcagtttcgcggatgccctcgtcaatggcctgttgaaggcgcttgggcgt
gacgcgcaggtgcttgcgtccggccgaatcttgctgcccaacaatcgcgccgtaaggacg
gttaccgaagccttcgttcgcgccagtgggggtggcttggtcctgccgaggttgcttgcg
atcggcgatcccgagcttggcgaacgtagcgggggagcgcttgacccgctcgactttgcc
gacgagatcgcccccgcaatcgagccgctggagcggcaattgctgctggcgcggttgctg
cgcgcagagggggagggggcggccgaggcgatgcggctcgccgccgaagtggcccggacg
atggacgccttggcgatcgaagaggtgcccgccgcggcgcttaccgacgcagtggctgga
aatgacgagcttgccgcccattggctgaaggcgatcgcgcgcttccgtctgctgcttgag
cgatggccatcgctgatggcggagcgcagcctgatgtcgcttgcggaacggcgggggctg
cagtttcgctcgctggcccggcgttggcgcgagcggggccctgccggcttcaccattgcc
gcaggcgtgaccaccgccgcgcctgccgtagcagagctgctggcgcaggtttcgcggctt
cccgagggcgcggttattttgcccgcgctcgccgatcagcggtctatgcccgatgagcaa
tgggatcagctcggtcccgacgaggagggtcggagcgcgccgacccatccgcaattccac
ctgaagcagctgctagcgcggatcgggatcaatcgcgcggaggttcggccttggatcggc
gccggtcgcgcctcgtcgacatcagcgcgcgggcgagcggtgatacaggccatggcttcg
ccccggttcaccgaccgctgggtggccttgccgccggccgaaaggcgcctgaccgggatc
aggattgccgaattcccagacccggcgagcgaggcgcaaggcattgccattgcgctccgg
gaagcgctcgagcggccgggcaagacagccgcgttggttactcccgaccgtcagttggca
tccagggtgtcggcccatctcaagcgctgggggatcgaggccgacgacagtgccgggcaa
ccgctttcggcgacccccgcaggcacattgctgctggcgactgcggccgcggtcgtcgag
cgattctcgccggttcggttgcttgcgatgctcaagcatccgcgcgtcggcggcgaaggg
gagcatcgccgccgctggctcgacgatgtgcgggcgatcgaccttgggctgcgtggcccg
cggcccaatgccggaatcaagggactcgatgagcattttgctgaggcgcacgaggtgcca
agggccgcttggcaccgaatccgtccggctgtcgaagcactcgaccggccggttgggact
ttggacctggtggcgctggccgcgctgcttcgtgaaagcgtccatagcttggccggcgac
caggcctggagcggccctgacgggcgcgccgcagcggaattgctcggcgggctcgagcgt
tcatccgacggagcgaagatcggggtcgctcccggggatgtgttgccgctcctgggccag
ttgatggacggtgtgatcgtccggcggccttatggcggtcacccgcgcatcttcatctgg
ggtctgctggaagcccggcttcagcaagccgatctgatggtgctcggtgggatgaatgag
ggcgtctggccttcgcttccgccgccggacccatggctggccccacagatacggcagacg
ctggggcttccagggcttgaatttcgaaccggcctggcggcgcatgatttcatgagcgcg
ctcggtgcgccgcgcgtgctgttgacccgttcgcggcgcgacagccgctcgccgaccatc
gcctcgcgcctgtggcttcgcctccaggcaatgaccgggggaatgacccgcgaccagcgg
ttggagcggttggcgcaggcactggatgcgtcggacaaggtcgagcctgccggccgcccg
gcgccaaggccgccgatcgaggtacggccacggcggatcgcagtaacagacctcgaccgt
ctgaaggccgatcccttcgccttctatgccaaggccatcctcgaccttcgcgcactagac
ccggtcgatgccgaacatcatgcggcctggaagggaactgcggtccacacggtgctggaa
agctggttcaagggagacggatgcgatcccgaacgattggcgggacgggcccaggcgatg
atcgcggacgagcgaatccatccgatgctccgcgccctatggtcgccgcggctgatggaa
tcgatcgagtggatcgcggcggaaaccgcaagcgacctcgcggcgggtcgcacacccgtg
cttgccgaggaaaagggcgaggcggaggtggcggggatcctgctgtatggcaaggtcgac
cggatcgaccgtctcggcgatggccgcctggcgatcgtcgattacaagaccgggcaggcg
cccaagcccaaggccgtcgccgaaggtttcgcgctgcagcttggcctgttgtcgctaatc
gcgcgcggcggcggcttcggcgcggtcaagggcgaagccggtgcgcatgaatattggtcg
ctggcgaagaagaacggcaagttcggttatcgtcagtcacccgacgacggcgatccctcg
gcatttgtggacagtgcctatcgccacttcgcggcgaccgtttcggcttatttgctggga
agcgaacccttcaccgccaaactcgacccggcctacgccccctatgaggattacgaccag
ctcatgcgtctagaggaatggtatggccgcgattga
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