KEGG   Sphingomonas xanthus: FMM02_03500
Entry
FMM02_03500       CDS       T07168                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
sxa  Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:sxa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sxa03009]
    FMM02_03500
   03016 Transfer RNA biogenesis [BR:sxa03016]
    FMM02_03500
Enzymes [BR:sxa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     FMM02_03500
    5.4.99.29  23S rRNA pseudouridine746 synthase
     FMM02_03500
Ribosome biogenesis [BR:sxa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    FMM02_03500
Transfer RNA biogenesis [BR:sxa03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    FMM02_03500
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: QDP19108
UniProt: A0A516IQC9
LinkDB
Position
complement(688550..689233)
AA seq 227 aa
MTLEDQILFVDGEAIVIDKPEGLPVDTPRAGGDSVEARIDELRLGFRRAPVPMHRLDRDT
SGCLLFARNPRSRAQFQQAFERGEVFKSYLAVVDAQVADLEGIIELPVAKVSTARGGWRM
VPDDSGKPAMTRWKRIAVADGQSLVEFRPTTGRTHQIRVHAARGLGAAIVGDPVYSLPDD
ADLAGMTLPDSGMLLHAWRLVVPRSPKEDIDVTAPVPERFGRWHDFL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgacccttgaggaccagatcctgttcgtcgatggcgaggccatcgtgatcgacaagccc
gaaggactgccggtcgatacaccgcgcgccgggggcgacagcgtcgaggcgcggatcgat
gaactgaggctcggcttccgccgcgcgccggtgccgatgcatcggctcgaccgcgacacg
tcgggttgcctgctgtttgcgcgcaatccgcgttctcgcgcacagttccagcaggcgttc
gagcggggcgaagtgttcaaaagctatcttgcggtggtcgacgcgcaagtcgccgacctg
gaaggaatcatcgaacttcccgtcgccaaagtgtcgaccgcgcggggcggctggcgaatg
gtgccggatgacagcggcaagccggcgatgacccgctggaagcgaatagccgtcgccgat
gggcaaagccttgtcgaatttcgcccgaccacgggcaggacccaccagattcgggtgcat
gcggcgcgagggttgggggcggcgatcgtcggcgacccggtctattccttgcccgacgat
gcggatctggccggcatgacgctgcccgacagcgggatgctgctccatgcctggcggctg
gtcgtgccgcgttcgcccaaggaagacatcgacgtgaccgccccggtgccggagcggttc
ggccgctggcacgactttttgtga

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