Sphingomonas xanthus: FMM02_03570
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Entry
FMM02_03570 CDS
T07168
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sxa
Sphingomonas xanthus
Pathway
sxa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FMM02_03570 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxa03019
]
FMM02_03570 (groL)
03110 Chaperones and folding catalysts [BR:
sxa03110
]
FMM02_03570 (groL)
03029 Mitochondrial biogenesis [BR:
sxa03029
]
FMM02_03570 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sxa04147
]
FMM02_03570 (groL)
Enzymes [BR:
sxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FMM02_03570 (groL)
Messenger RNA biogenesis [BR:
sxa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FMM02_03570 (groL)
Chaperones and folding catalysts [BR:
sxa03110
]
Heat shock proteins
HSP60 / Chaperonin
FMM02_03570 (groL)
Mitochondrial biogenesis [BR:
sxa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FMM02_03570 (groL)
Exosome [BR:
sxa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FMM02_03570 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FMM02_03570 (groL)
Exosomal proteins of breast cancer cells
FMM02_03570 (groL)
Exosomal proteins of colorectal cancer cells
FMM02_03570 (groL)
Exosomal proteins of bladder cancer cells
FMM02_03570 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
HTH_67
Motif
Other DBs
NCBI-ProteinID:
QDP19121
UniProt:
A0A516IQC6
LinkDB
All DBs
Position
complement(704143..705783)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFSRDARERIMKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVAKVVEDLKGRSKPVQGSNEIAQVGIISANGDVEVGQKIAEAMDKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMQVELSDPYILIHEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGEM
ISEDLGIKLENVTTAMLGTAKRVTIDKDNTTIVDGAGTREAIEARTGAIRQQIDNTSSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALDGLKGANDDQTRGVDIVRKAIESPLRQIAQNAGVDGAVVAGNLLREGDQTIGFN
AATDTYENLVSAGVVDPTKVVRTALQDAASVAGLLITTEATIAELPDDKPAMPMGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtgaaattctcgcgcgatgcgcgtgagcggattatgaagggcgtc
gacatcctcgccgatgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtcatc
gacaagagcttcggtgcgccgcgcatcaccaaggacggcgtcagcgtcgccaaggaaatc
gagcttaaggacaagtttgagaacatgggcgcgcagatgctgcgcgaagttgcctcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgtcctcgcccaggcgatcgtt
cgcgaagggatgaagtcggttgccgccggcatgaacccgatggacttgaagcgcggcatc
gatcttgccgttgccaaggtggtcgaggatcttaagggccgctcgaagccggtccagggt
tcgaatgaaatcgcccaagtcggcatcatttcggccaatggcgacgtcgaagtcggccag
aagatcgcagaagcgatggacaaggtcggcaaggaaggcgttatcactgtcgaggaagcc
aagggtctcgagttcgagctcgacgtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccttacttcatcaccaacccggaaaagatgcaggtcgagctgagcgacccctacatc
ctcatccatgaaaagaagctgtcgaacctgcaggcgatgctcccgattctggaagcggtc
gtccaatcgggtcgtccgctgctgatcatcgccgaggatatcgaaggcgaagcgcttgcg
accctggtcgtcaacaagctgcgcggcggcctcaaggttgctgcggtcaaggccccaggc
tttggcgatcgtcgcaaggcgatgcttgaagatatcgccatcctgaccggcggcgagatg
atctcggaagacctcggcatcaagctcgagaatgtcaccaccgcgatgctcggcaccgcc
aagcgcgtcaccatcgacaaggacaacaccaccatcgtcgatggcgcgggcacccgcgaa
gcgatcgaggcccggaccggcgccatccgtcagcagatcgacaacaccagcagcgattat
gaccgcgagaagctgcaggagcgtctggccaagcttgccggcggcgttgcggtgatcaag
gttggcggtgccaccgaagtcgaagtgaaagagcgtaaggaccgcgtcgacgacgcgctt
cacgcgactcgcgctgcggtcgaggaaggcatcgttccgggcggcggtaccgcgctgctc
tatgccaccaaggctctcgacggcctcaagggcgctaacgacgaccagacccgcggcgtg
gacatcgtccgcaaggcgattgaatcgccgcttcgccagatcgcccagaacgcgggcgtc
gatggcgcggtcgttgccggcaacctgctgcgcgaaggcgatcagacgatcggcttcaac
gctgcgaccgacacctatgaaaatctggtctcggccggcgtcgtcgacccgaccaaggtt
gtccgcacggcgcttcaggacgcggcttcggtcgctggcctgctgatcaccaccgaagcg
accatcgccgaattgccggacgacaagccggcaatgccgatgggcggcggcatgggcggc
atgggcggaatggatttctaa
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