Sphingomonas xanthus: FMM02_03920
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Entry
FMM02_03920 CDS
T07168
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sxa
Sphingomonas xanthus
Pathway
sxa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FMM02_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxa03021
]
FMM02_03920
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_03920
Enzymes [BR:
sxa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FMM02_03920
Transcription machinery [BR:
sxa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FMM02_03920
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FMM02_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
TmoB
IDH
Motif
Other DBs
NCBI-ProteinID:
QDP19184
UniProt:
A0A516IQY0
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All DBs
Position
complement(779116..780189)
Genome browser
AA seq
357 aa
AA seq
DB search
MAVNTKNWQELKKPNALERKPGTDVRRKAVFVAEPLERGFGMTLGNSLRRVLLSSLQGAA
VTSIKIEGVLHEFSSLAGVREDVTDIILNVKQIALKMEGEGPKRLQLSATGPGEVTAGQI
ATSGDIEVTNPELVICHLDDGATLNMELTADVGKGYVPSAANRPADAPIGLIPVDALYSP
VRQVAYKVENTRVGQELDYDKLTLTVETDGTVSPEDALGYSARILQDQLQLFVHFDDSQV
RAAPSAGMAGTPGIVAQEGAAADTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLV
QKTEAEMLRTPNFGRKSLNEIKEVLASMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaacacaaagaactggcaggaactaaagaagccgaacgcgctggagcgaaag
ccgggcaccgacgtccgccgcaaggcggtgttcgtggccgagccgctggagcgtggcttt
ggcatgaccctcggcaactcgctgcgtcgcgtgctgctgtcgtcgcttcagggcgcggcc
gtcacctcgatcaagatcgaaggcgtgctgcatgaattctcgagcctggcgggggtccgc
gaggacgtcacagacatcatccttaacgtgaagcagatcgcgcttaagatggaaggcgaa
ggcccgaagcgtctccagctgtcggcgaccggcccgggcgaagtcaccgccggccagatc
gccaccagcggcgatatcgaggtgaccaaccctgaactcgtcatctgccacctcgacgat
ggcgcgacgctcaacatggaactgaccgctgacgtcgggaagggctatgttccgtcggcc
gccaatcgtccggcggatgcgccgatcggcctgatcccggtcgatgcgctctacagcccg
gttcgccaggtcgcctacaaggtggaaaacacccgcgtcggtcaggaactggattatgac
aagctgaccctgaccgtcgaaaccgacggcactgtcagccccgaggacgcgctgggctat
tcggcccggattcttcaggatcagttgcagctgttcgtccacttcgacgacagtcaggtt
cgcgccgccccgtccgcgggcatggccggaacccccggcatcgtcgcccaggaaggcgcc
gccgcagacaccaaccagctcaaccgctacctactcaagaaagtcgatgagctggaactg
tcggtccgttcggccaactgcctgaagaacgacaatatcatctacatcggcgatctggtc
cagaagaccgaggccgagatgctccgcacgccgaacttcggccgcaagagcctcaacgag
atcaaggaagtccttgcctcgatgggcctgcgcctcggcatggacatccccggctggccg
ccggaaaatatcgaggaaatggccaagaagcttgagcaggaattgctgggctaa
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