Sphingomonas xanthus: FMM02_04000
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Entry
FMM02_04000 CDS
T07168
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_04000
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FMM02_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
AAA_10
TrwB_AAD_bind
AAA_19
Zot
AAA_7
TsaE
Motif
Other DBs
NCBI-ProteinID:
QDP19198
UniProt:
A0A516IQL5
LinkDB
All DBs
Position
complement(793647..795287)
Genome browser
AA seq
546 aa
AA seq
DB search
MASQATSSIFVGAAKGGARPQRLELKRANRHGLIAGATGTGKTVTLQGIVEGLSNVGVPT
FVADVKGDLAGLAMPGAATAKPHEAFTARAAEIGYQDWAYAGFPVQFWDLFAEQGHPVRT
TVSEMGPLLLARLMNLNEVQEGVLTIAFHVADKEGLMLLDLDDLQAMLVHIGERADELTL
EYGNVSKPSVGAIQRSLLQLRAQGGDHFFGEPALDLEDFLKIDENGQGIINILAADKLMA
SPRLYSTFLLWLLSELFEVLPEVGDSDKPKLAFFFDEAHLLFDDAPPALQDKVEQVVRLI
RSKGVGVFFITQNPIDIPDDVAGQLGNRVQHALRAFTPRDQAAVKAAAETFRPNPDVDVT
AAITELKVGEALVSLLQPDGSPSPVERTLIKPPRSRVGPLTAQERAILVQTDAIGAKYDL
LLDRESAEEILKAKSDEAAAAAAAVAAKSEAQKAAALQAKQDALAAKEEARAKAVEERLR
IQQMREEERRRKELEREEARRAREAAKPTMADKMIQSAGRSIASSVGRQIGNSLLRGIFG
GLKRGR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcaggcgacgagcagcatctttgtcggcgccgccaaaggcggtgcaaggccg
cagcggcttgagctcaagcgagccaaccggcacggcctgatcgccggcgcgactgggacc
ggcaagaccgtcaccctgcagggcatagtcgaaggactgtcgaacgtaggtgtcccgaca
ttcgtcgccgacgtgaaaggtgacctggccggtctcgcaatgcccggcgcggctaccgcc
aagccacacgaggccttcaccgcccgtgctgccgagatcggctatcaggactgggcctat
gccggtttcccggtccagttctgggacctgttcgccgaacaaggccatcctgtccgcacg
accgttagcgagatggggccccttttgctcgcccggctgatgaacctcaacgaggtgcag
gagggcgtgcttaccatcgccttccatgtcgccgacaaggaggggctgatgctcctcgat
ctcgacgatctgcaggcgatgcttgtccatatcggtgagcgggccgacgagctgacgctt
gaatatggcaatgtgtccaaaccgtcggtcggtgcgatccagcgctcgctgctccagttg
cgcgcccagggcggagaccatttcttcggcgaaccggcactcgatctagaagatttccta
aagatcgacgaaaacggccaggggatcatcaacatcctcgccgccgacaagctgatggcc
tctccgcggctctattcgaccttcctgctctggctcctgtcggaactgttcgaagtcctc
cccgaggttggcgacagcgacaagcccaagctggccttcttcttcgacgaagctcatttg
ctgttcgacgacgcgccgcccgccttgcaggataaggtagaacaggtcgtccgcctgatc
cgatcgaaaggcgttggcgtttttttcatcacccagaacccgatcgacattcccgacgat
gtcgcgggccagctgggcaaccgggtgcagcatgcgctgcgcgctttcaccccgcgcgac
caggcggcggtaaaggcggcggccgagactttccggcccaaccccgacgtcgatgtcacc
gcagcgattaccgagctgaaagtcggcgaggcgctggtctcgctactccagcccgatggc
tccccctcgccggtcgagcgcacgttgatcaagccgccgagatcgcgggttggcccactc
accgcccaggaacgcgcgatcctcgtgcagacggacgcgattggcgccaaatatgacctg
ctgctcgaccgcgaaagcgcggaggaaatcttaaaagccaagagtgatgaggctgccgcc
gccgccgcggccgtcgcggcgaaaagcgaggcgcaaaaggcagccgcactccaggccaag
caggacgcgctggccgcgaaagaagaggcgcgtgcaaaggccgtcgaggagcggcttcgg
atccagcagatgcgcgaggaagaacgccgccgcaaggagctggaacgagaagaagcgcga
cgcgctcgcgaggcggcgaagccgacaatggccgacaagatgatccagtcggcgggacgg
tcaatcgcctcctcggtcggtcgccagatcggcaattccctgctgcgcggcattttcgga
ggactgaagcgtggtcgctga
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