KEGG   Sphingomonas xanthus: FMM02_04700
Entry
FMM02_04700       CDS       T07168                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sxa  Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:sxa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sxa03400]
    FMM02_04700
Enzymes [BR:sxa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FMM02_04700
    5.6.2.6  RNA 3'-5' helicase
     FMM02_04700
DNA repair and recombination proteins [BR:sxa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FMM02_04700
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QDP19325
UniProt: A0A516IQY5
LinkDB
Position
927430..929838
AA seq 802 aa
MPGLPPIVERWFGDRGWRPRAHQLAMLEAARGGEHALLVAATGAGKTLAGFLATIVALIE
RPADGLHTLYISPLKALAVDVQRNLLTPIEEMQLDIRVETRSGDTPSNRKARQRARPPQI
LLTTPESLSLLLSYPDSASLFAGLKRVVVDEIHAFAKEKRGDLLALALSRLQALAPELRR
VGLSATISDPDAYRAWLAPHGEIDEVRLVEGEQGAEPDLSILIPDRTIPWGGHSGRHAAR
SVIEQIERHKTTLIFSNTRGLAELIFQELWAVNDNALPIGIHHGSLSLEARRKVEAAMAA
GRLRGLVATASLDLGIDWGDVDLVVQMGAPKGSSRLLQRIGRANHRLDEPSKGMIVPGNR
FEYLEARAALDAVEAGELDPELFRRGTLDTLAQHILGIACAGPFREAELLAEVRSAAPYA
GLTDDLWRQVLEFIATGGYALRAYDKFRRLVEVAPGEWRITRPAVAAQHRLNAGVIVDNP
MMDVRFKNGRTLGRVEEGFGSTLSVGDHIFFAGLSLEVIQFKDTDILVRASAKQARLVTY
GGQRMSMSTHLADRVRRFLASPDEWHRFPDDVREWLEVQQRRSILPQPDELLVETFPREG
VHYMCIYSFEGWNAHQSLGMLVTKRMESAGLKPLGFVANDYALAVYSLEPSDDPRPLFSP
DILEHEFIEWVEQSHLLRRAFREVAVIGGLVERQHPGKRKTGKQVSFSTDLIYDVLRKYE
PAHLLLQAAWNDARARMTELGRLARLVDRAAATLVHVRASRVTPMAVPLMVVIGREAAPA
GAADEALLIEAEALAEEAMRLD
NT seq 2409 nt   +upstreamnt  +downstreamnt
attccgggtttgccgcccatcgttgagcggtggttcggggatcgcggctggcggccccgc
gcccatcagcttgccatgctggaggccgcgcgagggggcgagcatgcactattggtcgca
gcgacgggtgccggcaagacgctggccgggttcctggccaccatcgttgccctgatcgaa
cgcccggccgacggtcttcacacgctttacatctcaccgctcaaggcactggcagtcgac
gtgcagcgcaatttgctgaccccgatcgaggaaatgcagctcgacattcgggtcgagacg
cgcagcggggacacaccctcgaaccgcaaggcgcggcagcgggcgcgcccgccgcaaatc
ctgctgaccacaccggaatcgctcagcctgttgctcagctatccggacagcgccagcctg
ttcgcgggcctgaagcgggtggtcgtcgatgaaatccacgccttcgccaaggaaaagcgg
ggtgacctgctcgcgctcgcactgtcgcggctgcaggcgcttgcgcccgagctgcggcgc
gtcgggctgagcgcgaccatctccgaccctgacgcttatcgcgcatggctggcgccgcac
ggggaaattgacgaggttcggttggtcgaaggcgaacagggggcggagcccgacctgtcg
atcctgatccccgaccggaccattccctggggtgggcatagcggccgccacgcagcacgc
agcgtgatcgaacagatcgagcggcataaaaccacgttgatcttttccaacacccgcggg
ctggcagaattgattttccaggaattatgggcggtcaacgacaatgcactgccgatcggc
atccatcatggatcgctgagcttggaagcgcggcgcaaggtcgaggcggcgatggccgct
ggccggctgcgaggtctggttgcaaccgccagcctggatctcggcatcgactggggtgat
gtcgacctggtcgtgcagatgggcgcgccgaaggggtcctcgcggctgctccagcggatc
ggccgagccaaccaccgccttgacgagccgtccaaggggatgatcgtccccggcaatcgc
ttcgaatatctcgaggcgcgcgccgcgctcgacgcggtcgaagcgggggaactcgacccc
gaactgtttcggcgcggaacgctcgatacgctggcccagcatatcctcgggatcgcctgc
gccggcccgttccgcgaggccgagctgctcgcggaagtgcggagcgccgcgccctatgcc
ggcctcaccgacgatttgtggcgccaggtgctcgagttcatcgccaccggcggctatgcg
ttgcgcgcctatgacaagttccgcaggctggtcgaggtcgcgccgggagaatggcggatc
acccgcccggccgtagctgcgcagcatcggctcaacgccggggtcatcgtcgataatccg
atgatggatgtccggttcaagaatggccggacccttgggcgggtggaggaagggttcgga
tcgacgctgagcgtcggcgaccacatcttcttcgccgggctgagtctcgaagtgatccag
ttcaaggatactgacatcctcgtgcgcgcttcggccaagcaggcgcggctggtgacatat
ggcggtcagcggatgagcatgtcgacccaccttgccgaccgggtccgccgcttcctcgcg
agtccggatgaatggcatcgttttcccgacgatgtgcgggagtggctggaggtgcagcag
cgccgctccatcctaccccagcccgacgaactgctggtcgagacctttccccgtgaaggc
gtacattacatgtgcatctacagcttcgaaggctggaacgcgcaccagtcgctgggcatg
ctggtcactaagcggatggaaagcgccggactgaagccgctaggctttgtcgccaacgat
tatgcactggcggtctacagcctggagccgtcggacgacccgcgaccgctattctcgccc
gacattctcgaacatgaattcatcgaatgggttgagcagtcgcacctgcttcgccgggca
tttcgggaggtggcggttatcggcggcttggttgagcggcagcatccgggaaagcgcaag
accggcaagcaagtcagtttctcgaccgacctcatttacgatgtcctgcgcaaatatgag
cctgcacacctgcttttgcaggcggcatggaacgatgcacgggcgcggatgaccgagctc
ggccgccttgccaggctggtcgaccgggccgccgcgaccctggtccatgtcagggcgagt
cgcgtaactccgatggcggtgccgctgatggtcgtgatcggccgggaggcggcgccggcg
ggcgccgccgatgaggcgctgctgatcgaggccgaggcgttggccgaagaggcgatgcgg
ctcgactag

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