Sphingomonas xanthus: FMM02_04760
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Entry
FMM02_04760 CDS
T07168
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxa03032
]
FMM02_04760
03036 Chromosome and associated proteins [BR:
sxa03036
]
FMM02_04760
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_04760
DNA replication proteins [BR:
sxa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FMM02_04760
Chromosome and associated proteins [BR:
sxa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FMM02_04760
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FMM02_04760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QDP19335
UniProt:
A0A516IQZ1
LinkDB
All DBs
Position
940592..940915
Genome browser
AA seq
107 aa
AA seq
DB search
MADAGIARSEGLHSGTLTRADLADIVHNRLGVSRAESASIVERVLHHMCHSLSEGSNVKV
SGFGTFILRDKGERIGRNPKTGVEVPIAPRRVLTFRASQIMRDRIAK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcgggtatcgcccgttcggaaggtctgcattcgggcacgctgacccgcgcg
gacctcgctgatatcgttcacaaccggctgggcgtatcgcgcgcggagagcgcaagcatc
gtcgagcgggtgcttcaccacatgtgccattcgctgagcgagggttcaaacgtgaaggta
tccggctttggcaccttcatcctgcgggacaagggcgagcggatcggccgcaacccgaag
accggagtcgaagtcccgattgcgcctcgccgcgtcctgactttcagggccagccagatc
atgcgcgacaggattgcgaagtag
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