KEGG   Sphingomonas xanthus: FMM02_05770
Entry
FMM02_05770       CDS       T07168                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sxa  Sphingomonas xanthus
Pathway
sxa03030  DNA replication
sxa03410  Base excision repair
sxa03420  Nucleotide excision repair
sxa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sxa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FMM02_05770 (polA)
   03410 Base excision repair
    FMM02_05770 (polA)
   03420 Nucleotide excision repair
    FMM02_05770 (polA)
   03440 Homologous recombination
    FMM02_05770 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sxa03032]
    FMM02_05770 (polA)
   03400 DNA repair and recombination proteins [BR:sxa03400]
    FMM02_05770 (polA)
Enzymes [BR:sxa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FMM02_05770 (polA)
DNA replication proteins [BR:sxa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FMM02_05770 (polA)
DNA repair and recombination proteins [BR:sxa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FMM02_05770 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FMM02_05770 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH HHH_2 DprA_N DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: QDP19513
UniProt: A0A516IRH9
LinkDB
Position
1149848..1152643
AA seq 931 aa
MAEPQNHLYLVDGSSYIFRAYHRLPPLTNRHGTPAGAVYGYTAMLWKLADGLNKADGPTH
MAVILDASSKSHRNAMYDQYKANRPPPPDDLVPQFPLIRTATRAFSIPCIEEEGLEADDI
IACYVMAAKRAGWKATIVSSDKDLMQLVDDEAGIDMLDTMNDRRIDRAYVEGKFGVGPEK
VGDVLALMGDSVDNVPGVPGVGPKTATQLIQQYGDLDKVLASVGEISKPKLKQNLTEHAD
NARLSRELVRLVCDAPLPEPLEDLALKGIPPEPLREFLEDQGFKSLLNRVGGSRGASSGG
NSPVDVMASRPAPSTPAEPEKITVDRTQYETVTSEEALDRWIAEARARGLVAIDTETDCI
DCIIANLAGISLATEPNRACYIPVGHIGQDMLTETPVQLAKDLVLAKLKPLLEDPAVLKI
AHNLKYDWVMLAKAGIAVAPYDDTLVMSFDLDAGRSNHGLDDLAKQHFDHECIAFKSVCG
TGAKQISFDKVPLDAATEYAAEDADICLRLWQRLKPRLAAEGGNRVYEMVDRPLVASIGK
MERRGIKVDRDYLAQLSGTFATEIAALEEKVFEAAGGPFTIGSPAQLGHVLYERLGLKGG
RKGKSGQYSTDVTELERLAGEGVDAARLVLDWRQLSKLKSTYTDALQAQINPDTGRVHTS
FSLSGAQTGRLSSTEPNLQNIPIRTEIGRKIRDAFVAEPGHVLLSADYSQIELRLAAHMA
DVPQLKEAFRAGEDIHAMTAEELFGTVDRDTRGKAKTVNFAILYGISSWGLAGRLGIPRE
EGKAIIDRYFSRFPGIRTYIDDTLAFVREHGFTRTLFGRKTHFPNIRASNPNFRASAERA
AINAPIQGTSADLIKRAMNRMDGALAEAGLGDVRMLLQVHDELLFEVPQGQEDAAAKVVR
SVMAAAAEPALTLDVPLDVEVGWGAHWGAAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggccgaaccgcagaaccacctctatctcgtcgacgggtccagctacatcttccgggcc
tatcaccggctgccgcccctgactaaccgccatggcacgccagccggcgccgtctatggc
tatactgcgatgctgtggaagctggccgacgggttgaacaaggccgacgggccaacgcac
atggcggtgatcctcgacgcgtcgagcaagagccaccgcaacgccatgtacgaccagtat
aaggcaaaccggccgccgccgcccgacgacctggtcccgcaattcccgctgatccgcacc
gcaacccgcgctttctcgatcccttgtatcgaggaagaggggctggaagccgacgacatc
atcgcctgctatgtgatggccgccaagagggccgggtggaaggcgaccatcgtcagcagc
gacaaggatttgatgcagctggtcgacgacgaggcgggcatcgacatgctcgacacgatg
aacgaccggcggatcgaccgggcctatgtcgagggcaagttcggcgttgggccggaaaag
gtaggcgatgtgctggcgctgatgggcgacagcgtcgacaatgtcccgggcgttcccggc
gtcggacccaagaccgcaacccagctaatccagcaatatggcgacctcgacaaggtgctt
gcgagcgtcggcgagatcagcaaacccaagctgaagcaaaatctcaccgaacatgccgac
aatgcgcgattaagccgtgaactcgtgcggctggtctgcgacgcgccgctgcccgagccg
ctggaggatttggcgctcaagggcatcccgcccgaaccgctgcgcgaattcctggaggac
caggggttcaagtcgttgctcaaccgggtcggcggaagtcgcggcgcgtcaagcggcggc
aactcaccggtcgacgtcatggcgtcgcggcctgccccgtccactcccgcggaaccggag
aaaatcactgtcgaccggacgcagtatgaaacggtgacgagcgaggaagcactcgatcgc
tggatcgccgaagcgcgggccagagggctggttgcgatcgacaccgagactgactgtatc
gactgcatcatcgccaaccttgccgggatcagcctggcgaccgaacccaaccgggcctgt
tacatccccgtcggccacatcgggcaggacatgctgaccgaaacgccggtgcagctggcc
aaggatctggtgctcgcgaaactgaaaccgctgctagaagacccggcggtgctgaagatc
gcgcacaacctcaaatatgactgggtgatgctggccaaggccgggatcgcggtcgcgcct
tatgacgacacgctggtgatgagcttcgatctcgacgccggccggtcgaaccatgggctg
gacgacctcgccaagcagcatttcgatcatgagtgcatcgccttcaagtcggtatgcggg
actggcgcgaagcagatcagcttcgacaaggtgccgctcgacgcggcgaccgaatatgcc
gcggaggacgccgatatctgcctgcggttgtggcaacggctgaagccgcgccttgcagcc
gaaggcggcaaccgcgtctacgagatggtcgaccggccgctggttgcgtcgatcgggaag
atggaacgtcgcgggatcaaggtcgaccgcgactatctggcgcaattgagcggtacgttc
gcgaccgagattgcggcgctggaagagaaagtgttcgaggccgcgggcgggcccttcacc
atcggttcgccggcgcagcttggccacgtgctttacgagcggctgggccttaaaggcggt
cgcaagggaaagagcggccaatattcgaccgacgtcaccgagctggaacggcttgccggc
gaaggcgtggatgcggcgcgactggtcctcgactggcgccagctgtcgaaactcaagtca
acctataccgacgcgctacaggcgcagatcaaccccgacaccggccgggtgcacaccagc
ttcagcctgtcgggcgcgcaaaccgggcgtttaagttcgaccgaacccaatttacagaat
attccgatccgcaccgaaatcggccgcaagatccgcgacgcgttcgtcgccgagccaggc
catgtgcttttgagcgccgactatagccagatcgagcttcggctggcggcgcacatggcc
gatgttccgcaactcaaggaggcgtttcgcgccggcgaggacattcacgcgatgaccgcc
gaagaattgttcggcaccgtcgaccgcgatacgcgcggcaaggccaagactgtcaatttc
gcgatcctctacggtatttccagctgggggctggccgggcgactggggattccaagggaa
gagggtaaggcgatcatcgatcgctacttctcccgctttcccggcatccgcacttatatc
gacgacacgctggcgttcgtgcgcgagcatggcttcacccgcacccttttcgggcgcaag
acgcatttccccaacatccgcgcgtccaaccccaatttccgggccagcgccgagcgggcc
gcgatcaacgcgcccatccagggcaccagtgctgatctcatcaagcgggcgatgaaccgg
atggacggggcattggctgaggctggcctgggcgatgtccgcatgctgctgcaggtgcat
gacgaattgctgttcgaagtaccccagggccaggaggatgccgccgccaaggtagtgcgc
tcggtgatggccgccgccgccgagcctgcgctcacgctcgacgtgccgctcgatgtcgag
gttggctggggcgcacactggggcgcggcgcattga

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