KEGG   Sphingomonas xanthus: FMM02_05895
Entry
FMM02_05895       CDS       T07168                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sxa  Sphingomonas xanthus
Pathway
sxa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sxa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FMM02_05895 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sxa03400]
    FMM02_05895 (xth)
Enzymes [BR:sxa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     FMM02_05895 (xth)
DNA repair and recombination proteins [BR:sxa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FMM02_05895 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: QDP19534
UniProt: A0A516IRU2
LinkDB
Position
1176426..1177304
AA seq 292 aa
MPPEPGPFHVRGIGTSAFTGTPRSLQDIRVTKLKIASWNINSVRARAHIVERFLDEEQPD
ILCLQETKAQDMVFPGQMFHSRGYVHHELNGQKMHHGVAILSRLPLHDSGRHDWQDNGEA
RHVGARLACGIRLENVYVPAGGDIPDRNLNPKFGQKLDFIERMTRWSEKLAEPTLIVGDF
NIAPLECDVWNHKALLNVVSHTPLEVETLERLRAAHDWVDLGRKFIPAPERCFTWWSYRA
QDWEASDRGRRLDHMWASPELAAQATAHRVLEPCRSWDKPSDHVPLVVELEV
NT seq 879 nt   +upstreamnt  +downstreamnt
atgcccccggagccagggcctttccatgttcgcggcatcggcacttcggccttcacaggc
acgccaaggtcgctacaggacattcgcgtgaccaagctcaagatcgcatcctggaatatc
aacagtgtccgtgcccgggcgcatatcgtcgaacgcttcctagacgaggagcagcccgac
atattgtgcctgcaggaaaccaaggcgcaggacatggtcttcccaggccagatgtttcac
tcgcgcggctatgtccaccatgagctcaatggccagaagatgcatcacggggtcgcgatc
ctttcacggctgccgctgcacgacagcgggcggcacgactggcaggacaatggcgaggcg
cgccacgtcggtgcgcggctggcctgcggtatccgcctcgaaaatgtctatgttcccgcc
ggcggcgacatccctgaccgcaacctcaatcccaagttcggccagaagctcgacttcatc
gaacgcatgactcggtggtcggaaaagttggctgagccgactttaatcgtcggggatttc
aacatcgcgccgctcgaatgtgacgtctggaaccacaaggcgctgcttaacgtagtcagc
cacacgccgcttgaagtcgagacgctcgagcggctgcgcgcggcgcacgactgggtcgac
cttgggcgcaagttcatccccgcgcccgaacgctgcttcacctggtggagttatcgcgcc
caggactgggaagcgagcgatcgcggccggcgcctcgaccatatgtgggcctcccccgag
cttgcggcgcaggcgaccgcgcaccgggtcctcgagccatgccgcagctgggacaagccg
tcagatcatgtcccgctggttgtcgagcttgaggtgtga

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