Sphingomonas xanthus: FMM02_06115
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Entry
FMM02_06115 CDS
T07168
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sxa
Sphingomonas xanthus
Pathway
sxa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FMM02_06115
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sxa01007
]
FMM02_06115
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxa03016
]
FMM02_06115
Enzymes [BR:
sxa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FMM02_06115
Amino acid related enzymes [BR:
sxa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FMM02_06115
Transfer RNA biogenesis [BR:
sxa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FMM02_06115
Prokaryotic type
FMM02_06115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
QDP19572
UniProt:
A0A516IRN4
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All DBs
Position
complement(1214183..1216534)
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AA seq
783 aa
AA seq
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MKFSLSWLKDHLDTDADAAAVAETLTRIGLEVESVDNPAEALRPFTVARVLTAERHPQAD
KLQVLSVDIGDGEPLQVVCGAPNARAGMVGVFGGPGTYVPGSDFTLKKAAIRGVESNGMM
CSARELQLGTDHDGIIELAADAPVGTSFADFAGLDDPIFDISITPNRQDCMGVRGIARDL
AATGLGALKPLKVPAIEGSFDNPVAIRTDDPEGCPAFFGRTVRGISNGASPDWMQRRLVA
AGQRPISALVDITNYVMIDLGRPAHAYDLSELTGAVSARRAREGETVLALNGKQYELDSS
MTVIADEAQVHDIGGIMGGEHSGVSETTSETLLEIAYFTPENIARTGQKLQLTSDARSRF
ERGVDPAFLDDGLAVLTGLVLDICGGEASRVTRAGQLPVTPKRIAFEPSKAASLAGMEVA
EAEQRAILQRLGFEFDGKDVVVPSWRRDIDGGADLVEEVTRIVGFDAIPSTPLPRASGVA
RPTATRGQLAERRVRRAAAARGLDEAITWSFIAEREAALFGGSAHALANPISEEMKHMRP
SLLPGLVAAARRNADRGAASIRLFEVGRRYQADGERPTVGLLLAGDKRPRGWQSGKARPF
NAFDAKAEALALLDAAGAPVASLQLSMGAGDAWHPGRSATLGLGKNMLAAFGELHPRIAK
ALDAPVGTMAAEIYLDAIPAPRSADRARPAFSPPLLQAVSRDFAFLVPENLSADTLIRAV
RGADKVAITDARLFDRYEGEQGLSLAVEVRLQPGEKSFTEAEIAEIGKKVVAAAEKLGAQ
LRG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcgctgtcgtggctcaaggatcatctcgacaccgacgccgatgcggcggcg
gtcgccgagacgctcacccgcatcgggctcgaggtggaaagcgtcgacaatccggctgaa
gcgcttcggccgttcaccgtcgcccgagtcctcaccgccgagcgccatccgcaggccgac
aagctgcaggtgctgagcgtcgacatcggcgatggcgagccgttgcaggtcgtctgcgga
gcgcccaacgcaagggcggggatggtcggcgtgttcggcggtcctggcacttatgtcccg
ggaagcgacttcaccctcaagaaagcggctatccgcggcgttgaatccaacggcatgatg
tgcagcgcccgcgagcttcagctggggacggatcatgacggaatcatcgaactggcagcc
gacgctccggtcggcaccagcttcgccgatttcgcggggctcgacgatcccattttcgac
atttcgatcacccccaaccggcaggactgcatgggcgtccgcgggatcgcccgcgacctc
gcggcaaccggactgggcgccctcaagccgctaaaggtgccggcgatcgaagggagtttc
gacaacccggtcgcgatccgaaccgacgaccccgaaggctgcccggcgttcttcgggcgc
accgtgcgcggcatttccaatggcgcttcgcccgactggatgcagcgccgccttgtggcg
gccggacagcggcccatctcggcgctggtcgacatcaccaattatgtcatgatcgatctc
ggccgcccggcccatgcctacgacctcagcgagctgaccggcgcggtatcggctcgccgc
gcgcgcgagggcgaaacggtacttgccctcaacggcaaacagtatgaactcgattcctcg
atgaccgtcatcgccgacgaagcgcaggtccatgacattggcgggatcatgggcggcgaa
cattcaggggtcagcgagacaaccagcgaaacgctgctcgagatcgcctatttcaccccc
gagaatatcgcccggaccggccagaagctgcagcttaccagcgatgcgcgcagccggttc
gagcgcggtgtcgacccggccttcctggacgacggactggccgtgctgaccgggctggtc
ctcgacatctgtggcggcgaagcaagccgagtgacccgcgccggccaactgccggtgacg
ccgaaacgcattgcgttcgagccgtccaaagccgcttcgctcgcggggatggaggttgcg
gaagcggaacagcgcgcgatcctccagcggcttggcttcgagttcgacggcaaggatgtg
gtggttcccagctggcggcgcgacatcgatggcggggccgacctcgtcgaggaagtgacc
cggatcgtcggcttcgacgccattccctcgaccccgctgccccgtgccagcggcgtggcc
cggcccaccgccacgcgcggtcagctggccgaacggcgggttcgccgcgctgccgccgcg
cgcgggctggacgaggctatcacctggagcttcatcgcggagcgggaagccgcgctgttc
ggtgggtctgcccatgcgctggccaacccgatcagcgaagagatgaagcatatgcgtccc
tcgctgctgcctggtctggtcgcggcggcgcggcgcaatgccgatcgcggcgcggcgagc
atccgcctgttcgaggtcggtcggcgctatcaggccgacggcgagcggcccaccgtcggc
ctcctcctggccggcgacaagcggccgcggggatggcaatcgggcaaggcccggccgttc
aatgcattcgatgccaaggccgaagcgctcgccctcctcgacgccgccggcgctcccgtc
gccagcctccagctgtcgatgggcgcgggcgatgcctggcaccccggccgatcggccacg
ctcggcctcggcaagaatatgctggccgccttcggcgagctccacccgcggattgccaag
gcgctcgacgccccggtcgggaccatggcggcggagatctacctggatgccatccccgcg
ccgcgcagcgccgaccgggcccgaccggcattcagcccgccattgcttcaggcggtgtcc
cgcgacttcgccttcctcgtgcccgaaaatctttcggccgacacgctgatccgtgcggtg
cgaggcgccgacaaggtggcgatcaccgacgcgcggctattcgatcgctatgaaggcgaa
cagggattgagcctggccgtcgaagtcaggcttcagccgggcgagaaaagctttaccgag
gccgagatcgccgaaatcggcaagaaggtcgttgccgccgccgagaagctgggggcgcag
ctcagggggtaa
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