Sphingomonas xanthus: FMM02_06310
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Entry
FMM02_06310 CDS
T07168
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
sxa
Sphingomonas xanthus
Pathway
sxa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FMM02_06310 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_06310 (recF)
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FMM02_06310 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SbcC_Walker_B
AAA_29
AAA
AAA_27
ABC_tran
Zeta_toxin
nSTAND3
Aq_aa27
Motif
Other DBs
NCBI-ProteinID:
QDP19608
UniProt:
A0A516IRR6
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All DBs
Position
1250860..1251921
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AA seq
353 aa
AA seq
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MTAVTRLSLSEFRNYRNALVYAAPGFVLLSGPNGAGKTNILEAVSLLAPGRGLRQVPLGE
IRRSGSEAGMAVAAKLDDGTEIGTGASATAPDRRQVRINGAAASVNALGERLAILWLTPA
MDRLFTDSAGGRRRFLDRLVLALEPGHAHHAARYEAAMRARNKLLGEAHWDTGWLASLEM
QMADHGEAVAAARGRTVSALTEMLAHLPDDDFPRASLQLDGWGGADLAATLGAGRGRDAA
AGRTLDGPHRQDLAVTHLTKGQPAARGSTGEQKALLLSLVLAHAALVEQRRGAPPVLLLD
EVAAHLDPDRRATLYARLAGRSQVWMTATEAALFDGITAATRLRVEDGSISAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtgacccgcctgtctctcagcgaatttcgcaactaccgcaacgcgctggtc
tacgccgcgccgggcttcgtcctcctcagcggcccgaatggcgcgggcaagaccaacatc
ctggaggctgtgtcgctgctcgcccctggccgggggctgcggcaggtgccgcttggcgaa
atccgacgaagcggaagcgaggccggcatggcggttgccgccaaactcgacgacgggacc
gagatcggtaccggggcgagcgcgactgcgcccgatcggcggcaagtgcggattaatggt
gccgcggcatcagtcaatgcgctgggcgaacggctcgcgattctctggctgaccccggcg
atggaccggctgttcaccgacagcgcgggcggtcgccgccgttttctcgaccggctcgtt
ctcgcgctggagcccggccatgcccatcacgccgctcgctacgaagcggcgatgcgagcg
cgcaacaagcttctcggcgaagcgcattgggacactggctggcttgcttcgctggaaatg
caaatggccgatcatggcgaggctgtcgccgccgcccgagggcgtaccgtttcagcgctg
accgagatgttggcccaccttcccgatgatgactttccccgcgcctcgttacagcttgac
gggtggggcggcgctgatcttgcggcgacgcttggcgctgggcgcggccgcgatgccgcc
gccggccggacgctcgacgggccgcatcggcaagatctcgccgttacccatctgaccaag
ggacagccggcggcgcgcggttccacgggagagcagaaggcgctcctgctaagcttggtg
ctggcccatgccgcgctggttgagcagcggcgcggggcgcccccggttctcctacttgac
gaagttgccgcccatctcgaccctgatcgccgcgcaacgctttacgcccggctcgccggg
cgtagtcaggtatggatgaccgcgaccgaagccgcattgtttgacggcattaccgccgcg
acccgcttgcgggtagaggatggcagcatctcggcagcctga
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