Sphingomonas xanthus: FMM02_06335 Help Entry FMM02_06335       CDS       T07168                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism sxa  Sphingomonas xanthus Pathway sxa02020   Two-component system sxa02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sxa00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     FMM02_06335 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     FMM02_06335 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sxa03021]     FMM02_06335 (rpoN) Transcription machinery [BR:sxa03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      FMM02_06335 (rpoN) SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Arg_repressor TetR_N HTH_21 HTH_IclR Motif Other DBs NCBI-ProteinID:  QDP19613 UniProt:  A0A516IRT0 LinkDB All DBs Position complement(1258324..1259781) Genome browser AA seq 485 aa AA seqDB search MGLGPRLDLRVSQQLVMTQQLQQAIKLLALSNLELDAVIAEEIAKNPLLEARPGEGGEGA VLVREDREFGDEAADPTGSDELIGKLGGAEDSPIDMDWREAALESDSFADVGGGGGPDEA FDFDRLEGGDEGLAEHLLSQVYGIGGTQARLADAIVRELEETGYLGTQLSLIAEECDASL PEAEEALALVQSLDPPGIAARNLEECLALQAKAVDRYDPAMARLIANLDLLAKGRMADLR RICGVDEDDLSDMVRELRSYDPKPGCRFVIREPEAITPDLFIRRGRDGWVIELNNAALPR VLVNRRYHAELKAGAQDKASKAWLTDCLASANWLVKALDQRARTIVKVATEIVKQQRGFF EDGVGSLRPLTLAKVAEAIEMHESTVSRVTTNKYLSCEQGLFELKFFFGSGVASDDGEGA AAQAVKAAIKSIVDEEREVLSDDGIVALLKEQGIDIARRTVVKYREAMGIGSSIQRRRQR KMAAG NT seq 1458 nt NT seq  +upstreamnt  +downstreamnt atggggctgggcccgcgtctcgaccttcgcgtttcgcagcagctggtgatgacccagcag ttgcagcaggccatcaagctgcttgccctaagcaatctcgagcttgacgcggtcatcgcc gaagaaatcgccaagaatccattgcttgaagcgcggcccggcgaaggcggtgaaggtgcg gtcttggtgcgcgaggaccgcgagttcggcgacgaagccgccgacccgaccggaagcgac gaactcatcggcaagctgggcggcgccgaggatagtccgatcgatatggattggcgcgaa gccgcgctggaatccgacagtttcgcggacgtcggcggcggcggcggcccggacgaagct ttcgacttcgaccggctcgaaggcggggatgaaggtctggcagaacatctgcttagccaa gtttacggcatcgggggaacccaggcccgactggcggacgcaatcgtcagggagctggaa gaaaccggctatctcggaacacaactgtccctgatcgccgaggagtgcgacgcgagcctg cccgaagcggaagaggcgctggcgctggtccagtcgctcgatccgcccgggattgccgcc cgcaaccttgaagaatgcctcgccctgcaggcgaaggcggtcgaccgatacgatccggca atggcccgactgatcgccaacctcgacctgttggcaaagggccggatggccgacctgcgc cggatctgcggcgtcgatgaagacgatctttccgacatggtccgtgagctgcgcagctat gacccgaagcccggctgtcggttcgtcattcgcgagcccgaagcaatcacgccggacctg ttcatccggcgcggaagggatggctgggtcatcgagctgaacaatgccgcgctgccgcgc gtgctggtcaatcgccgctaccacgcggaactgaaggccggtgcccaggacaaggcgtcc aaggcctggctgactgattgcctcgccagcgccaactggctggtcaaggcgctcgaccag cgggcccgcacgatcgtcaaggtggcgacggaaatcgtgaagcagcagcggggatttttc gaggacggtgtcgggtcgctgaggccgctgacgctagccaaggtcgcagaggcgattgaa atgcatgaatcgaccgttagccgggtgaccaccaacaaatatctttcctgcgagcaggga ttgttcgagctgaaattcttcttcgggtccggagtcgcgtcggacgatggcgaaggcgcc gcggcccaagcggtcaaggcagcgatcaagtcgatcgtcgacgaggagcgcgaggtcctt tccgacgacggcatcgtcgcgctgctcaaggagcaggggatcgatatcgcccgccgcacg gtcgttaaataccgcgaggcgatggggataggttcttctatccagcgccgccgccagcgg aagatggccgccggctag

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