Sphingomonas xanthus: FMM02_07090
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Entry
FMM02_07090 CDS
T07168
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sxa
Sphingomonas xanthus
Pathway
sxa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FMM02_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_07090
Enzymes [BR:
sxa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FMM02_07090
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FMM02_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
FA
Motif
Other DBs
NCBI-ProteinID:
QDP19743
UniProt:
A0A516IS52
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All DBs
Position
1407001..1408407
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AA seq
468 aa
AA seq
DB search
MPLPDDLDRTGLLAEAKGGDNAPALSVSELSGALKRTVETAFGHVRVRGEISGWKRHGSG
HCYFTLKDENACIDAVIWKGQAASLAFRPEDGAEVICTGKLTTYAGRSKYQIVVTRMELA
GEGALMALLDRRRRALAAEGLFDEARKRRLPFLPRLIGVVTSPTGAVIRDILHRLEHRCP
TRVMVWPVPVQGEGSADKIAAAIRGFANMDPRPDLLIVARGGGSIEDLWAFNEEAVVRAA
AESPIPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRAELAGMLAEAQHRMASTM
DRTWARLGERLDLAAQRWPEAANLFAPFSQRIDELGDRLPRGLVQRTAHARADHAEVAPR
LQPRLLTDRIARGHEKLLSLWRLAELAHPERPLQRGFVRVTDRAGKTLVHAADARAAGAI
DLHFADGRVAAQVGDLVGPKAFRPARRVERKPSNPYLPGQADLFGDED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgccactccccgacgacctcgacagaaccggcctcctagccgaggcgaagggcggggac
aacgcgccggcgctgtcggttagcgaactgtcgggcgcgctgaagcggacggtcgagacg
gcgttcggccatgtccgcgtgcgcggcgaaatcagcggctggaaacgtcatggttcgggc
cactgctatttcactctcaaggatgaaaatgcctgcatcgacgcggtgatctggaagggc
caggcggcaagcctcgcgttccgccccgaagacggcgcggaggtcatttgcaccggcaag
ctgacgacttacgcgggccggtcgaaatatcagatcgtggttacgcggatggaactggcg
ggggagggcgcgctaatggcgctgctcgaccgccgccgccgcgcgcttgccgccgagggc
ctgttcgacgaggccaggaaaaggcggcttccatttctcccccggcttatcggcgtggtg
acctcgccgaccggcgcggtgatccgcgacatcctgcaccggcttgagcaccgctgcccg
acgcgggtgatggtctggccggtgcccgtgcagggcgaaggatcggccgacaagatcgcg
gcggcgatccgcggttttgctaacatggacccccggcccgacctgttgatcgtcgcgcgc
ggcggcggctcgatcgaggatctgtgggcgttcaacgaggaagcggtggttcgcgctgcc
gccgaatcgccgatcccgctgattagcgcggtcggtcatgaaaccgatacgacgctgatc
gacttcgcgtccgaccggcgcgcgccgaccccgaccgcggcggcggagatggcggttccg
gttcgcgccgaactggctggcatgcttgctgaggcacagcatcgcatggcctcgaccatg
gaccggacatgggcgcggttgggcgaaaggctcgaccttgcggcgcagcgctggcccgag
gcggccaacctgttcgcgcccttttcccagcgtatcgacgagctaggcgatcggctgccg
cgcggtctcgtccagcgcaccgcccatgcccgcgccgatcatgccgaggtggcgccccgg
ctgcagccgcgcctgctgacagaccggatcgcgcgcggtcatgaaaagctcctgtcgctg
tggcggctggccgagctggcgcatcccgaacggccgctgcagcgcggcttcgtccgggtc
accgaccgggccgggaaaacgctggtccatgccgccgatgcccgcgcagcgggggcgatc
gaccttcatttcgccgacggacgggttgcggcccaggtcggcgatttggtcggacccaag
gcctttcgtccagctaggcgggttgagcgcaagccgtccaatccctatctgcctggacag
gccgacctgttcggcgatgaggattag
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