Sphingomonas xanthus: FMM02_08325
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Entry
FMM02_08325 CDS
T07168
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxa03016
]
FMM02_08325 (truB)
Enzymes [BR:
sxa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FMM02_08325 (truB)
Transfer RNA biogenesis [BR:
sxa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FMM02_08325 (truB)
Prokaryotic type
FMM02_08325 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QDP19959
UniProt:
A0A516ISW6
LinkDB
All DBs
Position
complement(1648805..1649692)
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AA seq
295 aa
AA seq
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MSLNGWIILDKPVGMGSTQAVSAVKRALRQAGEPKTKIGHGGTLDPLASGVLPIALGEAT
KLAGRMLDATKAYDFTIRFGEETDTLDAEGKITATSDIIPTRAQVGAVLPRFTGPIEQMP
PAYSALKVNGKRAYELARAGEQVALKTRQVTIHELRLLSADSRGATLCATVSKGTYIRSL
ARDIARALGSVGHVTMLRRTKAGPFSLDDAISLDFLDDAVKARALTRTVLPLEAGLDDIP
ALPVTPEQSRLLRHGQPLFGIPAQPGLHLAKDGDTPVALVEAEGVTLRVVRGFNL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaatggctggatcattctcgacaagccggtcggcatgggctccactcaggcc
gtgtccgcggtcaagcgcgcgctgcgccaagcgggcgagccgaaaaccaagattggccat
ggcggaacgctcgacccgctcgcctccggcgtgcttccgatcgcgctaggagaagcgacg
aagctcgccgggcggatgctggacgctaccaaggcctatgacttcacgatccgcttcggc
gaggaaaccgatacgctggatgccgaagggaagatcactgcgaccagcgacatcatccca
acgcgcgcgcaggtgggtgcggtgctgccgcgctttaccggcccgatcgaacagatgccg
cccgcttattcggcgctgaaggtcaacggcaagcgcgcctatgagttggcccgcgccgga
gagcaggtggcgctgaagacgcgccaagtgacgatccacgagctgcgccttttgtcggcc
gactcgcgtggcgcaacgctttgcgcgaccgtatcaaagggcacctacatccgatccctg
gcacgggacatcgcccgcgcccttggcagcgtcggccatgtcaccatgttgcgccgaacc
aaggccggtcccttctcgctggacgacgcgatttcgctggactttctggacgatgccgtt
aaggcgcgcgcattgacgaggacggttctcccgcttgaggcggggctggacgacatcccg
gccctccccgtcacccccgaacagtccaggctgctccgtcacggacagccgcttttcggg
atccccgcgcaaccggggcttcatttggcgaaggacggcgacacgccggttgccctcgtc
gaagccgagggcgtcacgcttcgtgtcgtgcgcgggttcaacctttag
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