KEGG   Sphingomonas xanthus: FMM02_09110
Entry
FMM02_09110       CDS       T07168                                 
Name
(GenBank) integration host factor subunit beta
  KO
K05788  integration host factor subunit beta
Organism
sxa  Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:sxa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sxa03032]
    FMM02_09110
   03036 Chromosome and associated proteins [BR:sxa03036]
    FMM02_09110
   03400 DNA repair and recombination proteins [BR:sxa03400]
    FMM02_09110
DNA replication proteins [BR:sxa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FMM02_09110
Chromosome and associated proteins [BR:sxa03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    FMM02_09110
DNA repair and recombination proteins [BR:sxa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      FMM02_09110
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-CCDC81_euk_2 SNF5 Nab2
Other DBs
NCBI-ProteinID: QDP20094
UniProt: A0A516ITD3
LinkDB
Position
1809480..1809776
AA seq 98 aa
MIRSELVQKLCSDFPDLSQREVENVVSAVFDSITDQLAQGGRVELRGFGAFSTRQRDART
GRNPRTGEAVEVDAKRVPYFKPGKEMRERLNLGEIAAQ
NT seq 297 nt   +upstreamnt  +downstreamnt
atgatccgttcggagctggtgcagaagctgtgcagtgactttccagacctgtcgcaacgc
gaggtcgaaaatgtggtctccgccgtgttcgattcgatcaccgaccagctcgcgcaaggc
ggccgcgtcgagctgcgcggctttggcgctttttcgacccggcagcgcgatgctcggacc
ggccgcaacccgcgcaccggcgaagcggtcgaggtcgacgccaagcgcgtcccctatttc
aaaccggggaaggaaatgcgcgagcggctcaatcttggcgaaatcgccgcccagtga

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