Sphingomonas xanthus: FMM02_09840
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Entry
FMM02_09840 CDS
T07168
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxa03032
]
FMM02_09840
03400 DNA repair and recombination proteins [BR:
sxa03400
]
FMM02_09840
Enzymes [BR:
sxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FMM02_09840
DNA replication proteins [BR:
sxa03032
]
Prokaryotic type
DNA Topoisomerases
FMM02_09840
DNA repair and recombination proteins [BR:
sxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FMM02_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QDP20613
UniProt:
A0A516IUN6
LinkDB
All DBs
Position
complement(1946794..1947810)
Genome browser
AA seq
338 aa
AA seq
DB search
MLRHSSDSEPGYSRKRKGRYWQYYDEKGNRVTSREEIDRLNSIALPPAYTDAWFCKDANG
HIQATGKDARGRKQYRYHPDYRSQRDAHKYDNCREFGEALPKLRKRIEKDLRRRKLVRET
VLAAVVRLLDKEFVRIGNEQYARRNQSFGLTTLRNRHLKKVGNKVKMRFKGKHGIVHEVA
VTDASLKRVVRQCEDLPGQHLFQYLNGDGEPKPVTSTDVNDYIREATGSEFTAKHFRTWG
ASVIFFEQLLEKSESKRLSLKTVLEPVAEALGNTPTMSRKSYVHPCLIEAVQERPEDPLK
GMKRPRARTRLTSAETGFLKYLKRKPRRRRIWRRKAAG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggcacagtagcgacagcgagcccggctacagccgcaagcgcaagggtcgctat
tggcaatattatgacgagaagggaaatcgcgttacgagccgcgaggagatcgaccggctg
aacagcatcgcccttccgcccgcctataccgacgcctggttctgcaaggatgccaacggc
cacatccaggcgaccggcaaagacgcgcgtgggcgcaaacaatatcgctaccaccccgat
tatcgttcgcagcgcgacgcgcataaatatgacaattgccgcgaatttggcgaagccctg
cccaaactgcgcaaacggatcgagaaggatttgcgcaggcgcaagcttgtccgcgaaacg
gtccttgcagcggtcgttcgcctgctcgacaaggagtttgtccggatcggcaacgagcaa
tatgccaggcgaaaccagagtttcggattgaccacgcttcgcaaccgccacctcaagaag
gtcggcaacaaggtcaagatgcgcttcaagggcaagcatggcatcgtccacgaagtcgcg
gtgaccgacgccagcctgaaacgggtggtgcgccagtgcgaggacctgcccggccagcat
ctgttccaatatctgaacggcgatggggagcccaagccggttacttcaaccgacgtcaac
gactatatccgcgaggcgaccggaagcgaattcacagccaagcatttccgcacctgggga
gcgagcgtcatttttttcgagcagcttctcgaaaagtcggaaagcaagcggctcagcctc
aagaccgtgctcgaacccgtcgcggaagcgctcggcaacaccccgacaatgagccgcaaa
tcctacgttcacccctgcctcatcgaagcggtgcaggagcggccggaagacccgcttaag
ggcatgaagcggccgcgcgcacgcacgcgtctgaccagcgccgagaccggcttcctcaaa
tatctgaagcgcaagccgcggcgccggcgcatctggcggcgcaaggcggcgggttga
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