Sphingomonas xanthus: FMM02_09925
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Entry
FMM02_09925 CDS
T07168
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sxa
Sphingomonas xanthus
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxa03019
]
FMM02_09925 (rapZ)
Messenger RNA biogenesis [BR:
sxa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FMM02_09925 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_29
AAA_18
AAA_16
AAA_27
AAA_28
AAA_33
AAA_23
Zeta_toxin
AAA_22
AAA_21
AAA_30
Rad17
SMC_N
APS_kinase
ABC_tran
RsgA_GTPase
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QDP20241
UniProt:
A0A516ITK2
LinkDB
All DBs
Position
complement(1965767..1966687)
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AA seq
306 aa
AA seq
DB search
MADPAKSLPRLLLVTGMSGAGKSTVLDALEDMGWDCVDNLPTAMLHDFVHGERQEQRSVP
IAVGMDVRSRGFDPTALPSQLRAIEGVTPEILYLDCAGTELIRRYDETRRRHPLAPDRPA
EDGISRERGATSPLRQMADTVLDTTDLRPTELRDELRCRYGGEVDQLVLTISSFGFARGI
SRTADLVFDLRFVDNPHWIEELRPLTGLDQAVQDHCRRDSAWSPTLDQVEALLQNLIPRY
WAAGKSYLTVAFGCTGGRHRSVAAATEMAKRLRDAGFSPIVRHRDLASPPSDTIEESPRR
SRARAK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcccgcaaagtccctgccccggctgctgcttgtcaccggcatgtccggcgcc
ggcaagtcgaccgttctcgatgcgcttgaggacatgggctgggattgtgtcgacaacctg
cccaccgccatgctccatgatttcgtccatggcgagcgacaggagcagcgctcggtgccg
atcgcggtcggcatggacgtccgcagccgggggttcgatcccaccgcgctgccgtcacag
ctgcgcgcaatcgagggggtaacgccagagattctctacctcgactgcgcggggaccgaa
ttgattcggcgctacgacgaaacccgccggcgccacccgcttgcccccgaccggcccgca
gaggacggcatctcccgggagcgtggtgcgacctcgcccttgcgccaaatggccgacacg
gtactcgacaccaccgacctgaggccgaccgaactgcgcgacgaactgcggtgccgttat
ggcggcgaagtcgaccagctggtgctgaccatttcctctttcggttttgcccgcggcatt
tcgcggaccgcggacctggtgttcgacctgcgcttcgtcgacaacccgcactggatcgag
gaattgcggccgctgaccgggcttgaccaggccgtacaggaccattgtcggcgagactcg
gcttggtccccgacgctcgatcaggtcgaggccctgttgcaaaatctgattccccgctat
tgggccgctggcaaaagctatctcaccgtggcgttcggatgcaccggtgggcgccaccgg
tcggtggcggcggcgaccgaaatggcgaagcggttgcgcgacgcgggattttccccgatt
gtccgtcaccgcgacctcgcttcgccaccgagtgatacgattgaagagtccccgcgaaga
tccagggcgcgggccaagtga
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