Sphingomonas xanthus: FMM02_10095
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Entry
FMM02_10095 CDS
T07168
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sxa
Sphingomonas xanthus
Pathway
sxa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sxa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FMM02_10095 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sxa01007
]
FMM02_10095 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxa03016
]
FMM02_10095 (aspS)
03029 Mitochondrial biogenesis [BR:
sxa03029
]
FMM02_10095 (aspS)
Enzymes [BR:
sxa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FMM02_10095 (aspS)
Amino acid related enzymes [BR:
sxa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FMM02_10095 (aspS)
Transfer RNA biogenesis [BR:
sxa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FMM02_10095 (aspS)
Prokaryotic type
Other AARSs
FMM02_10095 (aspS)
Mitochondrial biogenesis [BR:
sxa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FMM02_10095 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QDP20274
UniProt:
A0A516ITX0
LinkDB
All DBs
Position
2002297..2004087
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AA seq
596 aa
AA seq
DB search
MHAFRTHTCADLRASDVGSNVRLSGWIHRKRDHGGVLFVDLRDHYGLTQIVCDADSPALP
ILDSLRVESVVTIDGEVKARAEGTTNAKLPTGDIEVFARTVEIQSKADELPMPVAGEQDY
PEEIRLKYRYLDLRRDRLHANIMLRSKVIASIRRRMIDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFNAIEPVLSGVFAEFAGGNYVTPAGEFPRIPYKEAMLKYGSDKPDLRNPLI
VHDVGEHFAGSGFGLFAGMVEKGMVVRAVAAPATAEKSRKFFDEMNDWARQEGFAGLGYA
TSKGGEWGGPIAKNHGAEGMDRIAEQMGIGPDDGIFFAAGPEAQAARLAGLARTRVAEQL
GLIEQGAFRFCWIVDFPMFEYDEDAKKVDFSHNPFSMPQGGMEALETKDPLDILAWQYDI
VCNGVELSSGAIRNHRPDIMYKAFEIAGYSREDVDTSFPGMIGAFKYGAPPHGGSAPGID
RIVMLLANEPNIREVILFPMNQRAEDLMMNAPAPVTMKQLRELSIRVVADSEPEAN
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccttccgaacccacacctgcgccgaccttcgcgcttccgatgtcggatcgaac
gtccgcctgtcgggctggatccatcgcaagcgcgaccatggcggggtgctgttcgtggac
ttgcgcgaccattacggcctgacccagattgtctgcgatgccgacagcccggcgctgccg
atcctcgactcgctcagggtcgaaagcgtggtgaccatcgacggcgaggtgaaggcccgt
gccgagggaacgaccaacgccaaattgcccaccggcgatattgaggtgttcgcccgcacc
gtcgagatccagtcgaaggccgacgaactgccgatgccggttgccggggaacaggactat
ccggaggaaattcggctcaagtatcgctatctcgatcttcgccgcgaccggctccacgcc
aatatcatgctccgttcgaaggtgatcgcttccatccgccgccggatgatcgaccagggc
ttcaccgaattccagacacccatcctgaccgcctcgtcgcccgagggcgcgcgcgactat
ctggttccaagccgcgtccaccccggcaaattctatgcgcttccccaggcgccccagatg
ttcaagcagctgctgatggttgccggcttcgaccgctatttccagatcgcgccctgcttt
cgcgatgaagatgcccgcgccgatcggtcgcctggcgaattctaccagctcgacttcgag
atgagcttcgttacccaggacgacgtcttcaatgcgatcgagccggtgctgtcgggcgtg
ttcgcagaattcgcggggggcaattatgtcactccggccggcgagtttccgcgcatcccc
tacaaggaagcgatgctgaagtacggcagcgacaagccggacctgcgaaatccgctgatc
gtccatgacgtcggcgagcatttcgccgggtcggggtttggcctgttcgccggcatggtc
gaaaagggcatggtggtgcgcgccgtcgcagcgccggcaacggcagaaaaaagccgcaaa
ttcttcgacgagatgaacgattgggcgcggcaggaaggatttgccgggcttggctatgca
acgagcaagggcggagagtggggcgggcccattgccaagaaccatggcgccgagggcatg
gaccggatcgccgagcagatgggcatcggtccggacgacggcattttcttcgccgccggt
cccgaagcgcaggcggcgaggctcgccggccttgcccgaacccgtgtcgccgaacagctt
ggactgatcgaacagggtgcgttccgcttttgctggatcgtcgactttccgatgttcgaa
tatgatgaggatgcgaagaaggtcgatttcagccacaaccccttctctatgccccagggc
ggaatggaagcgctggagaccaaggacccgctcgatatcctggcttggcagtacgacatc
gtctgcaacggcgtggaattgagctcgggcgcgatccgcaaccaccgtccggatattatg
tacaaggcgttcgagattgccggctacagccgcgaggacgtcgacaccagcttcccgggc
atgatcggcgccttcaaatacggcgcgccgccgcacggcgggtcggccccgggtatcgac
cgtatcgtcatgctgctcgccaatgagccgaacatccgtgaagtcattctcttcccgatg
aaccagcgggcggaagacttgatgatgaacgcccccgcgccagtgacgatgaaacagcta
cgtgagctatcgatccgggtggtcgcggattccgagcccgaggccaactga
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