Streptomyces xiamenensis: SXIM_17410
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Entry
SXIM_17410 CDS
T03904
Name
(GenBank) RecD/TraA family helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SXIM_17410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxi03400
]
SXIM_17410
Enzymes [BR:
sxi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SXIM_17410
DNA repair and recombination proteins [BR:
sxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SXIM_17410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
AAA_22
AAA_16
Helicase_RecD
PhoH
PIF1
NPHP3_N
TraI_hel_assoc_N
DEAD
HHH_2
AAA
nSTAND3
HTH_IclR
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AKG43125
UniProt:
A0A0F7FTS3
LinkDB
All DBs
Position
complement(1877385..1879595)
Genome browser
AA seq
736 aa
AA seq
DB search
MSSHSAVLEGVLERITYANEENGYTVARVDTGGGGGELLTVVGALLGAQVGESLRMRGRW
GSHPQYGRQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRTAERIVEHFGVATLEVIEA
DAGRLIEVPGLGPKRTRLIAAAWVEQKAIKEVMVFLQSVEVSTSIAVRIYKKYGDASISV
VRNQPYRLAADVWGIGFLTADRIARAVGIPHDSPERVRAGLRHALSLASDQGHCFLPEER
LIAEAVKLLQVDTGLVIDCLGELAQDPEGVVREPVPDPEDPHGTVMAVYLPPFHRAELSL
AGQVRRLLRAGEDRLAAFAGVDWGRALGWLAERTRAELAPEQEAAVRLALTEKVAVLTGG
PGCGKSFTVRSVVELARARRAKVVLAAPTGRAAKRLAELTGARASTVHRLLELKPGGDAA
YDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEVLRDLL
ADGSPVPAVRLTRIFRQAQQSGVVTNAHRINAGRPPLTRGLADFFLFAEEDTEAAGRLTV
DVAARRIPARFGLDPRRDVQVLTPMHRGPAGAGALNGLLQEAVTPAGPGLPEKRFGGRIF
RVGDKVTQIRNNYEKGANGVFNGTVGVVRDLDADEQRLVVRTDEDEDVEYEFGELDELAH
AYAVTIHRSQGSEYPCVVVPVTTSAWMMLQRNLLYTAVTRAKRLVVLVGSRRALDQAVRS
VSAGRRFTGLDMRLAG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcacagcgcggtgctcgagggggtcctggagcgcatcacctacgccaacgag
gagaacgggtacaccgtcgcccgggtggacaccgggggcggtggcggtgaactgctcacc
gtcgtcggggcgttgctcggggcccaggtgggggagtcgctgcggatgcgcggccgctgg
ggctcgcacccgcagtacggacggcagttcacggtggagaactacacgacggtgctgccc
gccaccgtccagggcatccggcgctacctgggctcggggctgatcaagggcatcgggccc
aggaccgccgagcggatcgtcgagcacttcggggtggccaccctggaggtcatcgaggcg
gacgcgggccggctgatcgaggtgccggggctcggccccaagcgcacccggctgatcgcc
gcggcgtgggtggagcagaaggccatcaaggaggtcatggtcttcctgcagagcgtggag
gtgtccacctccatcgcggtgcggatctacaagaagtacggggacgcctcgatctccgtc
gtacggaaccagccctaccggctggccgccgacgtgtgggggatcggcttcctgaccgcc
gaccgcatcgcgcgggcggtcggcatcccgcacgacagccccgagcgggtgcgggccggg
ctgcgccacgcgctgtccctggcgagcgaccaggggcactgcttcctgcccgaggagcgg
ctgatcgcggaggcggtgaagctgctccaggtggacaccgggctggtcatcgactgcctg
ggggagctggcgcaggacccggagggggtggtgcgcgagccggtgccggacccggaggat
ccgcacggcaccgtgatggcggtgtacctgccgcccttccaccgggccgagctgtcgctg
gccggtcaggtgcggcggctgctgcgggccggggaggaccggctggcggccttcgccggg
gtggactggggccgggcgctgggctggctggcggagcgcacccgggcggagctggcgccc
gagcaggaggcggcggtgcgtctggcgctgaccgagaaggtggcggtgctgaccggcggc
ccggggtgcgggaagtcgttcacggtgcgctcggtggtggagctggcgcgggcgcggcgg
gcgaaggtggtgctggcggcgccgacggggcgggcggcgaagcggctggcggagctgacg
ggggccagggcgtccacggtgcaccggctgctggagctgaagccgggcggcgacgcggcg
tacgaccgcgaccggccgctggacgcggatctggtggtggtggacgaggcgtcgatgctg
gatctgctgctggccaacaagctggtgaaggcggtgccgccgggcgcgcacctgctgctg
gtgggggatgtggaccagctgccgtcggtgggcgcgggcgaggtgctgcgagatctgctg
gcggacggctccccggtgcccgcggtccggctgaccaggatcttccggcaggcgcagcag
tccggggtggtgacgaacgcgcaccgcatcaacgccggccggccgccgctgacgcggggg
ctcgcggacttcttcctgttcgccgaggaggacacggaggcggccgggcggctgacggtg
gacgtggcggcgcgccggattccggcgcggttcgggctcgatccgcgccgggacgtgcag
gtgctcaccccgatgcaccgcggtccggccggggcgggggcgctgaacgggctgctccag
gaggcggtgaccccggccgggcccgggctgccggagaagcggttcgggggccggatcttc
cgggtgggcgacaaggtcacccagatccgcaacaactacgagaagggcgccaacggcgtc
ttcaacggcacggtcggggtggtgcgcgacctggacgcggacgagcagcggctggtggtg
cgcaccgacgaggacgaggacgtggagtacgagttcggtgagctggacgagctggcgcac
gcgtacgcggtgacgatccaccgttcgcagggcagcgagtatccgtgtgtggtcgtcccg
gtgacgacgagcgcctggatgatgctccagcgcaatctgctgtacacggcggtgacgcgg
gcgaagcggctggtggtgctggtgggttcgcggcgcgccctggatcaggcggtacgcagc
gtctcggcggggcgccggttcacggggctcgacatgcggctcgcggggtga
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