Streptomyces xiamenensis: SXIM_18550
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Entry
SXIM_18550 CDS
T03904
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sxi
Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxi03021
]
SXIM_18550
Transcription machinery [BR:
sxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SXIM_18550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
MarR_2
HTH_Crp_2
Sigma70_ECF
GerE
HTH_3
MarR
HTH_10
DUF7343
HTH_Tnp_ISL3
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AKG43239
UniProt:
A0A0F7FSH3
LinkDB
All DBs
Position
2020347..2021225
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AA seq
292 aa
AA seq
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MTEQPTMHEIAGAAAPSAPESIHELLPEIPEDQRFDEIAPMDARALSKSLFVRLRNLEEG
THEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVGTIGLIKAIDRFEADRGVEFP
TFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRSPTVAELAERLN
LSHDEIVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDHGLEGIEYVESLKPLIAE
LSPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLARTLRKLRQGLMVED
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagcagcccacgatgcacgagatcgccggggccgccgccccgtcggcgcccgag
agcattcacgagctgctgcccgagatccccgaggaccagcgattcgacgagatcgccccg
atggacgcgcgtgcgctgtccaagagcctgttcgtcaggctgcggaatctcgaagagggc
acccacgagtacgcgtatgtccgcaacaccctggttgagctgaatctggcgctggtgaag
ttcgccgcctcgcgattccgctcccgcagtgagccgatggaggacatcgtccaggtcggc
accattggacttatcaaggcgatcgaccggttcgaggccgatcgcggggtggaattcccc
accttcgcgatgcccacgatcatcggggagatcaagcgtttcttccgcgacacctcctgg
tcggtacgggtgccgcgacgactccaggaactgcgcctggacctggccaaggccggcgac
gaactcgcgcagcagctggaccgctccccgaccgtggccgagctcgccgagcggctcaac
ctcagccacgacgagatcgtggagggcatggccgcctccaacgcgtacaccgccagttcg
ctggacgcgcagcccgaggaggacgacgcggagggcgcgctggccgaccggatcggctac
gaggaccacggcctggagggcatcgaatacgtcgagtccctcaagccgctcatcgccgaa
ctgtcgccgcgcgaccgcaagatcctctccctgcggttcgtggccaacatgacgcagtcg
gagatcggggaagagctgggcatctcccagatgcacgtctcgcggctgctcgcgagaacg
ctgcgcaagctgcgacaaggtctgatggtcgaggactga
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