KEGG   Streptomyces xiamenensis: SXIM_18550
Entry
SXIM_18550        CDS       T03904                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
sxi  Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:sxi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sxi03021]
    SXIM_18550
Transcription machinery [BR:sxi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SXIM_18550
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_24 MarR_2 HTH_Crp_2 Sigma70_ECF GerE HTH_3 MarR HTH_10 DUF7343 HTH_Tnp_ISL3 DUF1492
Other DBs
NCBI-ProteinID: AKG43239
UniProt: A0A0F7FSH3
LinkDB
Position
2020347..2021225
AA seq 292 aa
MTEQPTMHEIAGAAAPSAPESIHELLPEIPEDQRFDEIAPMDARALSKSLFVRLRNLEEG
THEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVGTIGLIKAIDRFEADRGVEFP
TFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRSPTVAELAERLN
LSHDEIVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDHGLEGIEYVESLKPLIAE
LSPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLARTLRKLRQGLMVED
NT seq 879 nt   +upstreamnt  +downstreamnt
gtgaccgagcagcccacgatgcacgagatcgccggggccgccgccccgtcggcgcccgag
agcattcacgagctgctgcccgagatccccgaggaccagcgattcgacgagatcgccccg
atggacgcgcgtgcgctgtccaagagcctgttcgtcaggctgcggaatctcgaagagggc
acccacgagtacgcgtatgtccgcaacaccctggttgagctgaatctggcgctggtgaag
ttcgccgcctcgcgattccgctcccgcagtgagccgatggaggacatcgtccaggtcggc
accattggacttatcaaggcgatcgaccggttcgaggccgatcgcggggtggaattcccc
accttcgcgatgcccacgatcatcggggagatcaagcgtttcttccgcgacacctcctgg
tcggtacgggtgccgcgacgactccaggaactgcgcctggacctggccaaggccggcgac
gaactcgcgcagcagctggaccgctccccgaccgtggccgagctcgccgagcggctcaac
ctcagccacgacgagatcgtggagggcatggccgcctccaacgcgtacaccgccagttcg
ctggacgcgcagcccgaggaggacgacgcggagggcgcgctggccgaccggatcggctac
gaggaccacggcctggagggcatcgaatacgtcgagtccctcaagccgctcatcgccgaa
ctgtcgccgcgcgaccgcaagatcctctccctgcggttcgtggccaacatgacgcagtcg
gagatcggggaagagctgggcatctcccagatgcacgtctcgcggctgctcgcgagaacg
ctgcgcaagctgcgacaaggtctgatggtcgaggactga

DBGET integrated database retrieval system