Streptomyces xiamenensis: SXIM_19240
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Entry
SXIM_19240 CDS
T03904
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sxi
Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SXIM_19240
Enzymes [BR:
sxi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SXIM_19240
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
TrbL_3
Motif
Other DBs
NCBI-ProteinID:
AKG43308
UniProt:
A0A0F7FSL4
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Position
complement(2099376..2101229)
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AA seq
617 aa
AA seq
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MLMGAAVLAGVLAAPTAPAAADDPAGAPAAADVSVAASQLENLDRGLVSVHSGGNNLVSW
RYLATDPDNVAFNVYRGSVKVNDQPITGTTNFLHRDVPNSADYRVRAVVGGAEQDWSPHA
IQFRAGYYDIPIQQPPGGSGYTYNANDASVGDLNGDGQLDIVLKWDPSNSQDNANDGVTG
TTIIDGYTLAGQRLWRIDLGRNIRSGAHYTQFQVYDYDGDGSAEVVMKTADGTVDGTGRV
IGNASADYRNSAGRVLDGPEFLTVFNGRTGAAMATVDYVPARGSVSSWGDNYGNRVDRFL
AGTAYLDGSRPSIIMARGYYTRTVIAAWDWRDGRLTRRWTFDTNSSTNVGQGYDGQGSHS
LSIGDVDGDGRDEIVYGAMAVDDNGSRLWTTRTGHGDAQHLGNFNPNTSGLDYFKVSESS
GQPSSLYINPANGQIRWQTAAGGDNGRGVAGNIWSGSVGAQMWSSRDGQLRNVGGQEIGR
KPSSTNFLVWWDGDPVRELLDDTRIDKYGPSGDTRLLTGSGVASNNGTKATPVLSGDILG
DWREEVIWRTSNNGALRIYSTPVETDRKITTLLHDRMYRTGLAWQNTAYNQPPHTSFYLG
QGMGTPPRPTALAATGG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatgggcgccgccgtactcgccggggtgctcgccgccccgaccgcgcccgccgcc
gcggacgatccggccggcgccccggcggccgccgatgtttcggtggccgcctcccagctg
gagaacctcgaccgcggtctggtcagcgtccactccggcggcaacaacctggtcagctgg
cgctacctggccaccgacccggacaacgtcgccttcaacgtctaccggggcagcgtcaag
gtcaacgaccagcccatcaccggcaccaccaacttcctgcaccgcgatgtccccaacagc
gccgactaccgggtgcgggccgtggtgggcggggccgagcaggactggtccccgcacgcc
attcagttccgcgccgggtactacgacatcccgatccagcagccgcccggcggctccggc
tacacctacaacgcgaacgacgcctccgtcggcgacctcaacggcgacggccagctggac
atcgtcctcaagtgggacccgtccaactcccaggacaacgccaacgacggggtcaccggc
accacgatcatcgacggctacaccctggccggtcagcggctgtggcggatcgacctgggc
cgcaacatccgctccggcgcccactacacccagttccaggtgtacgactacgacggcgac
ggcagcgccgaggtggtcatgaagaccgccgacggcaccgtcgacggcacgggccgggtc
atcggcaacgcctccgccgattaccgcaacagcgcgggccgggtcctggacggtcccgag
ttcctcaccgtcttcaacggccggaccggcgccgccatggccaccgtcgactacgtcccg
gcccgcggcagcgtcagctcctggggcgacaactacggcaaccgggtggaccgcttcctg
gccggcaccgcctacctcgacggctcccgcccctccatcatcatggcgcgcggctactac
acccggaccgtcatcgcagcctgggactggcgggatggccggctgacccggcgctggacg
ttcgacaccaacagctccaccaacgtcggccagggctacgacggacagggcagccacagc
ctgtccatcggcgacgtcgacggggacggccgcgacgagatcgtgtacggggcgatggcc
gtcgacgacaacggctcacggctgtggaccacccgcaccggccacggcgacgcgcagcac
ctgggcaacttcaaccccaatacctcgggcctggactacttcaaggtctccgagtccagc
ggccagccctcctccctgtacatcaaccccgccaacggccagatccgctggcagaccgcc
gcaggcggcgacaacgggcgcggggtggccggcaacatctggtccggctcggtcggcgcc
cagatgtggtcctcgcgcgacggtcagctgcgcaacgtgggtggccaggagatcggccgc
aagccctccagcaccaacttcctggtgtggtgggacggcgacccggtgcgcgagctgctg
gacgacacccgcatcgacaagtacgggcccagcggggacacccggctgctgaccggctcc
ggggtggcctccaacaacgggaccaaggccacccccgtgctctccggcgacatcctcggc
gactggcgcgaggaggtcatctggcgcaccagcaacaacggcgcgctgcggatctactcc
acccccgtcgagaccgaccgcaagatcaccacgctgctccacgaccggatgtaccgcacc
ggcctcgcctggcagaacaccgcgtacaaccagccgccgcacaccagcttctacctgggg
caggggatgggtaccccgccccggcccaccgccctcgccgccaccggagggtga
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