Streptomyces xiamenensis: SXIM_25040
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Entry
SXIM_25040 CDS
T03904
Name
(GenBank) dna polymerase iii subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi03030
DNA replication
sxi03430
Mismatch repair
sxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SXIM_25040
03430 Mismatch repair
SXIM_25040
03440 Homologous recombination
SXIM_25040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxi03032
]
SXIM_25040
03400 DNA repair and recombination proteins [BR:
sxi03400
]
SXIM_25040
Enzymes [BR:
sxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SXIM_25040
DNA replication proteins [BR:
sxi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SXIM_25040
DNA repair and recombination proteins [BR:
sxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SXIM_25040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
Rad17
zf-CXXC
AAA_30
AAA_14
AAA_16
AAA_18
AAA_5
nSTAND3
Mg_chelatase
AAA_19
AAA_28
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AKG43888
UniProt:
A0A0F7FVK0
LinkDB
All DBs
Position
complement(2708143..2710224)
Genome browser
AA seq
693 aa
AA seq
DB search
MSSLALYRRYRPETFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCRDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPASS
RYKIYIVDEAHMVTPAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLREYLGQVCEQEAIPVEGTVLPLVVRAGAGSVRDSMSVMDQLLAGAGEGGVTYDMA
TALLGYTDGALLDSVVEAFSRGDGAAAFDVVDRVIEGGHDPRRFVADLLERLRDLLILAA
VPDAADKGLIDAPADVLERLLGQARELGAAELSRAADLVNTGLTEMRGATSPRLQLELIC
ARVLLPAAYGNDERALQSRVERLERLGPPAGAAAAQAPPVAAPAPQAAPAPPAPAPQAAA
PQAPAAPAPQAPPPASPAPSGPRPGAWPTAAPAAPPTPPAAPAQGDGPRPGAWPTSAPAA
PAAPAPTPAPAPAPAPAAPVPAAAPAPGAGADLGRVQSMWGDILDAVKGRRRFSWILLSQ
NAHVAGFDGTTLQLGFATVGARDSFLGSGSEEVLRQTLSEVFHVQWKVDTVIDGGIGGTP
APAVTRPLPPGPAPQAPPPPPAASAPAPVSAPPPVPPTPEPSPAAVPPPPPPPAPEEDLP
EPGDRDPGSSSLSGHELIMRELGATVIEEFHHE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctctcgcgctgtaccgccgctatcgtcccgagaccttcgccgaggtcatcggg
caggagcatgtgaccgaccccctgcagcaggcgctgcggaacaacagggtcaaccacgcc
tacctcttcagcggcccgcgcggctgcggcaagacgaccagtgcgcgcattctcgcccgc
tgcctcaactgtgaacagggtcccacgcccaccccgtgcggggagtgccagtcctgtcgt
gatctggcgcgcaacggccccgggtccatcgatgtgatcgagatcgacgccgcctcgcac
ggtggtgtggacgacgcgcgggagctgcgggagaaggcgttcttcgggccggcgtccagc
cgctacaagatctacatcgtcgacgaggcgcacatggtcaccccggcgggcttcaacgcc
ctgctgaaggtggtcgaagagccgcccgagcatctgaagttcatcttcgcgaccaccgag
cccgagaaggtcatcggcaccatccggtcgcgcacgcatcactatccgttccggctcgtg
ccgcccggcacactgcgcgagtacctgggccaggtctgcgagcaggaggccatccccgtc
gagggcacggtgctgccgctggtggtccgggccggggccgggtccgtacgggactccatg
tccgtcatggaccagctgctcgccggtgcgggggagggcggtgtgacgtacgacatggcc
accgcgctgctcggctacacggacggggcgctgctggactccgtggtggaggcgttctcc
cggggggacggggccgccgcgttcgacgtggtggaccgggtcatcgagggcgggcacgat
ccgcggcggttcgtcgcggatctgctggagcggttgcgggacctgctgatcctggccgcg
gtgcccgacgccgccgacaaggggctgatcgacgccccggcggatgtgctggagcggttg
ctgggtcaggcgcgtgagctgggcgccgccgaactgagccgcgccgccgatctcgtcaac
accggattgacggagatgcggggcgccacctcgccccggttgcagctggagctgatctgc
gcccgggtgctgctgcccgccgcgtacgggaacgacgagcgggcgctgcagtcccgggtg
gagcgcctggagaggctcgggccgcccgccggggccgccgccgcacaggctccgccggtc
gccgcgcccgcaccgcaggccgctcctgccccgcccgctcccgcgccgcaggccgccgcc
ccgcaggcaccggccgctccggcgccccaggcaccgcctcccgcgtctcccgctccctcg
gggccccggcccggggcctggcccaccgccgctcccgccgcgcccccgacgccccccgcc
gcgcccgcgcagggggacggcccgcgtcccggagcctggcccaccagcgcgcccgccgca
cccgccgctccggctcccacgcctgccccggcacccgcccccgctcccgcagcgcccgtt
ccggccgccgctcccgcccccggcgcaggcgcggatctgggccgggtgcagagcatgtgg
ggggacatcctcgacgcggtgaaggggcggcggcggttcagctggattctgctgagccag
aacgcccacgtcgccgggttcgacggcaccaccctccagctcggcttcgccaccgtcggc
gcccgggacagcttcctcggcagcggcagcgaggaggtgctgcgccagaccctcagcgag
gtcttccacgtgcagtggaaggtcgacaccgtcatcgacggcggcatcggcggtacgccg
gcccccgccgtgacccgccccctcccgccgggtccggccccgcaggccccgccgcccccg
cccgccgcatccgctcccgccccggtctccgcgcccccgcccgtaccccccacccccgag
ccgtctcccgccgccgtgccgcccccgcctccgccgcccgcgcccgaggaggacctgccg
gagcccggcgaccgtgatccgggcagctcctcgctctccggccacgaactgatcatgcgc
gagctgggcgcgacggtcatcgaggagttccaccacgaatga
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