Streptomyces xiamenensis: SXIM_26110
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Entry
SXIM_26110 CDS
T03904
Name
(GenBank) seryl-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SXIM_26110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sxi01007
]
SXIM_26110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxi03016
]
SXIM_26110
Enzymes [BR:
sxi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SXIM_26110
Amino acid related enzymes [BR:
sxi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SXIM_26110
Transfer RNA biogenesis [BR:
sxi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SXIM_26110
Prokaryotic type
SXIM_26110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AKG43995
UniProt:
A0A0F7FU70
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All DBs
Position
2831744..2833024
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AA seq
426 aa
AA seq
DB search
MIDLRLLREDPDRVRASQRARGEDVDIVDSLLAADELRRSSSVRFDALRGEQKQLGKQIP
KATGDEKTALLQRAGELSAAVKAADAERDEAAARAQELLLGIGNLVHPDVPVGGEDDFTV
RETLGTIRDFAAEGFEPKDHLELGQGLGAIDTERGAKVSGSRFYYLTGIGALLELALVNA
AVAQATEAGFTPMITPALVKPRAMEGTGFLGQAAADVYHLEKDDYYLVGTSEVPLAAYHM
EEILDADALPRRYAGFSPCFRREAGSYGKDTRGIFRVHQFDKVEMFCFVDPAEAEGELER
LLAWEKQWLTSLELPFQVIDVASGDLGASASRKYDCEAWIPTQGKYRELTSASNCNEFQA
RRLQVRMREKGGAVRPLATLNGTLCAIPRTIVALLENHQQADGSVRVPQALRPYLGGREV
LEPVST
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaccttcgcctgcttcgtgaggaccctgaccgagtacgcgcctcccagcgcgcc
cgtggcgaggatgtcgacatcgtcgactcactcctcgccgccgacgaactgcgccggtcc
tccagcgtgcgcttcgacgcgctgcgcggtgagcagaagcagctcgggaagcagatcccg
aaggccaccggcgacgagaagaccgcgctgctccagcgggccggcgagctgtccgccgcc
gtcaaggccgccgacgccgaacgcgacgaggccgccgcccgcgcccaggaactcctcctg
ggcatcggcaacctcgtccaccccgacgtccccgtcggcggcgaggacgacttcaccgtc
cgggaaaccctgggcaccatccgcgacttcgccgccgagggcttcgagcccaaggaccac
ctggagctcggccagggcctgggcgccatcgacaccgaacgcggcgccaaggtctccgga
tcccgcttctactacctcaccggcatcggcgccctgctggaactggccctggtcaacgcg
gccgtcgcccaggccaccgaggccggcttcacgccgatgatcacgccggcgctggtcaag
ccgcgcgccatggagggcaccggcttcctcggccaggccgccgccgacgtctaccacctg
gagaaggacgactactacctggtcgggacctcggaggtgccgctcgccgcgtaccacatg
gaggagatcctggacgcggacgcgctgccgcgccgctacgccgggttctcgccgtgcttc
cgccgggaggccggctcgtacggcaaggacacccgcggcatcttccgtgtgcaccagttc
gacaaggtggaaatgttctgcttcgtcgaccccgcggaggccgagggagagctggaacgg
ctgctggcgtgggagaagcagtggctgacctccctcgaactgcccttccaggtcatcgac
gtggcctccggcgacctcggtgcctcggcctcccgcaagtacgactgcgaggcgtggatc
cccacccagggcaagtaccgcgagctgacctccgcctccaactgcaacgagttccaggcc
cgccggctccaggtgcggatgcgcgagaagggcggcgccgtacggccgctggccacgctc
aacggcaccctgtgcgccatcccgcgcaccatcgtcgcgctgctggagaaccaccagcag
gccgacggttcggtgcgggtgccgcaggcgctgcgtccctacctgggcggccgtgaggtg
ctggagccggtcagcacgtga
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