Streptomyces xiamenensis: SXIM_29640
Help
Entry
SXIM_29640 CDS
T03904
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi00270
Cysteine and methionine metabolism
sxi01100
Metabolic pathways
Module
sxi_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SXIM_29640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sxi03000
]
SXIM_29640
03032 DNA replication proteins [BR:
sxi03032
]
SXIM_29640
03036 Chromosome and associated proteins [BR:
sxi03036
]
SXIM_29640
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sxi02048
]
SXIM_29640
Enzymes [BR:
sxi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SXIM_29640
Transcription factors [BR:
sxi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SXIM_29640
DNA replication proteins [BR:
sxi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SXIM_29640
Chromosome and associated proteins [BR:
sxi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SXIM_29640
Prokaryotic defense system [BR:
sxi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SXIM_29640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
PmbA_TldD_3rd
Motif
Other DBs
NCBI-ProteinID:
AKG44348
UniProt:
A0A0F7FVP8
LinkDB
All DBs
Position
3203535..3204560
Genome browser
AA seq
341 aa
AA seq
DB search
MAGKGAGRKALDTVKEFIHRLVHGEDEDRIDSDLHALGDPRTALVLEPLRWLIKAIETEG
RDPYKVIVLEQVPTVLPLWDVYAKVLRGGEGRLQGVKYEAECWVLKTEQFGVPQTRNRAV
LVARRPGHGAIEPLRTTHMSFGRRRDTSPEGIPGVSGSKLPWLSMAAALEAASKAKDSPV
DVSRLRTDGAIRFFVVSNYGSGGDPKNRGRRTSSQPAFTVTGKISRNKVYKSLADYDADK
PDRFTIPESGVLQTFPHNFPWSGKDQAQQVGNAVPPRLGMHVLSTVLRGKAPSEEELAAA
ATWPAVPGTTTEALRVIGCGDESRCPPGSHKVSAVRPESAL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggaaagggagcgggccggaaagcgctggacacggtcaaggaattcattcaccgc
ctcgtgcacggggaggacgaggacaggatcgacagtgacctgcatgccctcggcgacccg
cgcaccgcgttggttctggaacctcttcgctggctcatcaaggcgatcgagacggagggg
cgagatccttacaaggtgattgtcctggagcaggtgcccaccgttctacccctttgggat
gtttatgcaaaggttctgcgtggcggcgaggggaggctccagggcgtcaagtacgaagcg
gaatgctgggttctgaagaccgagcagttcggagtcccccagacgcggaatcgggccgtg
cttgtcgctcgacggccaggccatggcgccatcgaaccgctcaggaccactcacatgtcc
ttcggccgccgtagggacacctcgcccgaggggattcccggggtctccggaagtaaactg
ccctggctgtccatggcggccgcactggaggcggcgagcaaggcgaaggactcacccgtg
gacgtctcccgactcaggacggatggcgccataaggttcttcgtcgtttccaactacggt
tccggcggtgatcccaagaaccgaggccgccgaacttcttcgcagccggctttcacagtt
accggtaaaatttcccgcaacaaggtctacaagagcctcgcagactacgacgcggacaag
ccggaccggttcacgattcccgagtccggagtcctgcagactttcccccacaacttcccc
tggtcgggcaaggaccaagcccagcaggttggcaacgccgtgccgcccaggctcggcatg
catgtgctcagcaccgttctccgcggaaaggcaccttccgaggaagagctcgccgccgcc
gcgacctggcccgcagtgcccggcaccaccaccgaagcactgcgggtcatcgggtgcggc
gatgaaagtcggtgccccccgggctcgcacaaggtcagtgccgttcgtcctgagtccgcc
ctctga
DBGET
integrated database retrieval system
