Streptomyces xiamenensis: SXIM_37650
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Entry
SXIM_37650 CDS
T03904
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi03420
Nucleotide excision repair
sxi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SXIM_37650
03430 Mismatch repair
SXIM_37650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxi03400
]
SXIM_37650
Enzymes [BR:
sxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SXIM_37650
DNA repair and recombination proteins [BR:
sxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SXIM_37650
MMR (mismatch excision repair)
Other MMR factors
SXIM_37650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKG45149
UniProt:
A0A0F7FX28
LinkDB
All DBs
Position
4020778..4024104
Genome browser
AA seq
1108 aa
AA seq
DB search
MAARLTHPGQLCELLGIPFTPEQLACITAPPAPQAIVAGAGSGKTTVMAARVVWLTGTGQ
VAPERVLGLTFTNKAAGELAERVRKSLAKAGIGQETTETGEPGGEPQISTYHAFAGRLLK
EHGLRLGIEPASRLLADAGRFQLAAEVLRAAPASFEAPAAGFTTLVTDLIALDGELAEHL
VPPERLRDFDRALLAELDATALTNNDLRRIREAAQGRGHLLDVVLDYRARKRARDLIDFG
DQIALAATLARDVPEVGRALREEYGVVLLDEYQDTSVAQRIMLAGLFGAGAGAGHPVTAV
GDPCQAIYGWRGASVANLDDFPDHFPAALGSPLLEEHGEGTSARRHSLSENRRSGGHLLQ
LANDLAAPLRALHPAVVPLRPAEGAERAGRVHCALLPTHAAELEWLADSLAHLVRTGTAP
GEIAVLCRTRNDFAEIQRELVERGVPVEVVGLSGLLYLPEIADLVAVCEVLADPTANAAL
VRLLTGPRWRVGPRDLALLGRRARILVRRAAPGADQDRLAAAVEGTDPAETTSLADALDT
FIGEDPDEDGLPFSAEARVRFAHLAAEIRELRRSLADPLMDVLHRVLAVTGLEVELSASP
QALAARRRETLTAFLDVAAAFAAGRTGVAVDGERLGGGLTAFLAFLRSAAQYDRGLDGSL
PSAENTVKVLTVHQSKGLEWDVVAVPGLCAGQGGFPSAQARDSWLKHPRTLPHPLRGDAA
TLPAIEGWTAAAYKAYSGLVAEHQLHEELRLGYVAFTRPRSLLLGSGHWWGPSQKKKRGP
SAYLEALRAHCESDPAHGEVEQWAEIPEDDEENPALAEPTEERAWPLPLEPVALARRRSA
ADRVLDLLREGFEERPAAVPGPPPQLTAEERRAVESWDRDLDALAGELRRAREGVREVPL
PVSLSATQVQRLASDPEGFARELARPMPRPPQPAARRGTRFHAWVESRFEELPLPMLGPD
ELPGAAEEGGDADVIADERELAALKEAFGRTPYARRTPYRIEAPFQLTLAGRVIRGRIDA
VYRTDDQGGERYEIIDWKTARRQDADPLQLAIYRLAWAERRGLPLNRVTAAFLYVRSGEV
VRPTVLPGRAGLERLLLGEESWEPNDPG
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcacgactgacgcatcccggacagctctgtgagctgctcgggatccccttcaca
cccgaacagctggcgtgcatcaccgcgccccccgcaccacaggccatcgtcgccggggcc
gggtccggcaagaccaccgtcatggccgcccgcgtggtgtggctcaccggcaccgggcag
gtcgcccccgagcgcgttctcggcctcaccttcaccaacaaggccgccggcgaactcgcc
gaacgcgtccggaagtccctcgccaaggcgggcatcggccaggagaccaccgagacgggg
gagcccggcggcgagccgcagatctccacctaccacgccttcgccggccgcctcctcaag
gagcacgggctgcggctgggcatcgagcccgcctcccggctgctcgccgacgccggacgg
ttccagctcgccgccgaggtcctgcgcgcggcgcccgcctccttcgaggcgccggccgcc
gggttcaccaccctggtcaccgacctcatcgcgctcgacggcgaactcgccgaacacctc
gtaccgcccgagcggctgcgcgacttcgaccgcgcgctcctcgccgaactcgacgccacc
gccctcaccaacaacgatctgcggcgcatccgcgaggccgcgcagggccgcggccacctc
ctcgatgtcgtcctggattaccgggcccgcaaacgcgcccgcgacctcatcgacttcggc
gaccagatcgcgctggccgccaccctcgcccgcgacgtccccgaggtcggccgggcgctg
cgcgaggagtacggcgtggtcctcctcgacgagtaccaggacacctccgtcgcccagcgc
atcatgctcgccgggctgttcggcgccggcgcgggcgccggccaccccgtcaccgccgtc
ggcgacccctgccaggccatctacggctggcgcggtgcctccgtcgccaacctcgacgac
ttccccgaccacttcccggccgccttggggtctcccctgctcgaagagcatggggaaggc
acctccgcccgccgtcactcgctcagcgagaaccggcgcagcggcgggcacctcctccag
ctcgccaacgacctcgccgcaccgctgcgcgccctgcaccccgccgtcgtaccgctgcgc
ccggccgagggcgccgagcgggcgggccgggtccactgcgccctgctgcccacccacgcc
gccgaactggagtggctcgccgactccctcgcccatctcgtgcgcaccggcacggccccc
ggcgagatcgccgtgctgtgccgcacccgcaacgacttcgccgagatccagcgcgaactc
gtcgaacgcggcgtccccgtcgaggtcgtcgggctctccgggctgctctacctgcccgag
atcgccgacctggtcgccgtctgcgaggtgctggccgaccccaccgccaacgccgcgctg
gtccggctgctcaccgggccccgctggcgggtcggcccccgcgatctggcgctgctcggg
cgccgggcgcggatcctggtgcgccgcgccgcccccggcgcggaccaggaccggctggcc
gccgccgtcgaaggcaccgaccccgccgagaccacctcgctcgccgacgcgctggacacc
ttcatcggcgaggacccggacgaggacgggctgccgttctccgccgaggcccgggtgcgg
ttcgcgcacctggccgccgagatccgggaactgcgccgctcgctggccgaccccctcatg
gacgtgctgcaccgggtgctggccgtcaccgggctcgaggtcgaactctccgcctccccg
caggcgctggcggcgcgccgccgcgagaccctcaccgccttcctcgatgtggccgccgcc
ttcgccgccggccgcaccggcgtcgccgtcgacggggaacggctgggcggcggcctcacc
gccttcctcgccttcctgcgctccgccgcccagtacgacaggggcctggacggctccctg
cccagcgccgagaacaccgtcaaggtgctcaccgtccaccagtccaagggcctggagtgg
gacgtggtcgccgtccccggactctgcgcggggcagggcggcttcccttccgcgcaggcg
cgcgactcctggctcaaacacccgcgcaccctgccgcatccgctgcgcggcgacgccgcc
accctgcccgccatcgagggctggacggccgccgcctacaaggcgtactccgggctggtg
gcagagcaccagctgcacgaggaactgcgcctgggctacgtcgccttcacccgcccccgc
agcctgctgctgggctcgggccactggtgggggcccagccagaagaagaaacgcggcccc
tccgcctatctggaggcgctgcgcgcgcattgcgagagcgaccccgcgcacggcgaggtc
gagcagtgggcggagatccccgaggacgacgaggagaacccggcactcgccgagcccacc
gaggagcgcgcctggccgctgccgctggagccggtcgcgctggcgcgccgccgcagtgcc
gccgaccgggtgctcgacctgctgcgcgagggcttcgaggagcggcccgccgccgttccg
gggccgcccccgcagctcacggcggaggaacggcgcgccgtcgagtcctgggaccgcgac
ctggacgccctcgccggcgagctgcgccgggccagggagggcgtacgggaggtgccgctg
ccggtgtcgctgtccgcgacccaggtgcagcggctggcgtccgacccggaggggttcgcg
cgcgagctggcccgcccgatgccgcgcccgccgcagccggcggcccgccgcggcacccgc
ttccacgcctgggtcgagtcgcgcttcgaggagcttccgctgccgatgctgggcccggac
gagctgccgggcgccgcggaggagggcggcgacgcggacgtgatcgcggacgagcgggag
ctggcggcgctgaaggaggcgttcggccgcaccccgtacgcgcgccgcaccccgtaccgc
atcgaggcgccgttccagctgaccctggccggccgggtgatcaggggccggatcgacgcc
gtctaccgcaccgacgaccagggcggcgagcggtacgagatcatcgactggaagaccgcc
aggcggcaggacgcggacccgctccagctggcgatctaccggctggcgtgggcggagcgg
cgcggtctgccgctgaaccgggtgacggcggcgttcctgtacgtacgcagcggggaggtc
gtacggcccaccgtgctgccggggcgggccggccttgagcggctgctgctgggggaggag
tcctgggagccgaacgaccccggatag
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