Streptomyces xiamenensis: SXIM_41240
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Entry
SXIM_41240 CDS
T03904
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi00300
Lysine biosynthesis
sxi00470
D-Amino acid metabolism
sxi01100
Metabolic pathways
sxi01110
Biosynthesis of secondary metabolites
sxi01120
Microbial metabolism in diverse environments
sxi01230
Biosynthesis of amino acids
Module
sxi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SXIM_41240
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SXIM_41240
Enzymes [BR:
sxi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SXIM_41240
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DLH
Motif
Other DBs
NCBI-ProteinID:
AKG45508
UniProt:
A0A0F7FXS3
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All DBs
Position
4402722..4404116
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AA seq
464 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYSAPPTDLNALDPKVWAHSVRRGEDGVVTVAGIGVDRLAR
THGTPAYILDEGDFRARCRAWRQAFGDGADVFYAGKAFLSRAVVRWLREEGLNLDVCSGG
ELATALAAGMPAASIAFHGNNKSEHEIRRAVEARVGRIVVDSYDEIDRVARIAREHGVRQ
PVLVRVTVGVEAHTHEFIATAHEDQKFGLALAGGAALDGVRRVLAEPQSLELLGVHSHIG
SQIFDLAGFEVSARRVVQLLATVRDEFGVNLPEIDLGGGLGIAYTSTDDPLEPFDIARTL
RDIVERECAAAGLDAPRLSVEPGRAIIGPSAFTLYEVGTVKPLEGLRTYVSVDGGMSDNI
RTALYDAEYSVALVSRASDALPMLSRVVGKHCESGDIVVRDAYLPADLAPGDLIAVAATG
AYCRSMASNYNHVTRPPVVAVTDGEDRVIVRRETEEDLLRLDVG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccaccccgccgggccccgtcacgccgatgtgctgcccgagggtcac
tacagcgccccgcccaccgatctcaacgccctggaccccaaggtctgggcccactccgtg
cggcgcggcgaggacggcgtggtcaccgtcgccggcatcggcgtcgaccggctcgcccgc
acccacggaacgcccgcctacatcctggacgagggcgatttccgggcgcgttgccgtgcc
tggcggcaggcgttcggcgacggcgccgacgtgttctacgccggcaaggcgttcctctcg
cgcgccgtcgtgcgctggctgcgcgaggaagggctcaacctcgacgtctgctcgggcggc
gaactggccaccgccctggcggccggtatgcccgcggcgtccatcgccttccacggcaac
aacaagtccgagcacgagatccgccgggccgtcgaggcccgcgtggggcgcatcgtcgtc
gactcctacgacgagatcgaccgcgtcgcgcggatcgcccgtgagcacggcgtacggcag
ccggtgctcgtgcgggtgaccgtcggggtcgaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcggcctcgcgctggccggcggcgccgccctggacggcgtg
cgccgcgtcctggccgagccccagagcctggaactgctgggcgtgcactcgcacatcggc
tcgcagatcttcgacctcgccgggttcgaggtctccgcgcgccgcgtcgtgcaactgctg
gccaccgtccgtgacgagttcggggtgaatctgcccgagatcgacctcggcggcgggctc
ggcatcgcgtacacctccaccgacgacccgctggagccgttcgacatcgccaggacgctg
cgcgacatcgtcgagcgcgagtgcgcggcggccggcctggacgccccccggctgtccgtc
gagccggggcgcgcgatcatcgggccctccgcgttcaccctctacgaggtcggcaccgtc
aagccgctggaggggttgcggacgtacgtcagcgtcgacggcgggatgtccgacaacatc
cgcaccgcgctgtacgacgccgagtactcggtggcgctggtctcccgggcctcggacgcg
ctgcccatgctgagccgcgtcgtcggcaagcactgtgagagcggcgacatcgtggtgcgc
gacgcgtacctccccgccgacctggcgccgggcgatctgatcgccgtcgccgccaccggc
gcgtactgccgctcgatggcgagcaactacaaccacgtgacccgcccgcccgtcgtcgcc
gtcaccgacggtgaggaccgggtgatcgtccggcgggagaccgaggaagatctgctgcgg
ctcgacgttggctga
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