KEGG   Streptomyces xiamenensis: SXIM_45030
Entry
SXIM_45030        CDS       T03904                                 
Name
(GenBank) Beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sxi  Streptomyces xiamenensis
Pathway
sxi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sxi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SXIM_45030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sxi03019]
    SXIM_45030
Messenger RNA biogenesis [BR:sxi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SXIM_45030
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 YicC-like_C
Other DBs
NCBI-ProteinID: AKG45887
UniProt: A0A0F7FYN0
LinkDB
Position
4813807..4815492
AA seq 561 aa
MSHPHPELGRPPKLPEGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTSLRNRLDDIEGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGTSERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDGRLTDLRAFARLGEEGIDLLLSDSTNAEVPGFVSPEREISGVLRQVFARADKRIIVAS
FASHVHRIQQIVDAAQEHGRKIAFVGRSMVRNMGIARDLGYLRVPPGLVVDVRALDDLPD
RDVVLVCTGSQGEPMAALSRMANRDHQIRIVEGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPRNLMPVHGEWRHLRANAELGALTGVPAD
RIVIAEDGVVVDLVKGKAKIVGKVQAGYVYVDGLSVGGVTESSLKDRRILGDEGFISVFV
VVDSSTGKIVSGPSIHARGSGIDDAAFAEVIPKIDEVLAKSAQDGVVEAHQLQQLVRRTV
GKWVSDVYRRRPMIMPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccccatccagaactcggccggccgccgaaactcccggagggcggcctgcgg
gtcaccccgctcggcggcctcggcgagatcggccgcaacatgacggtcttcgagtacggc
ggccggctgctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggcatc
gacctgatcctgccggacttcacgtccctgcggaaccgtctcgacgacatcgagggcatc
gtcctcactcacggccacgaggaccacatcggtggcgtgccgtacctgctccgtgagaag
ccggacatcccgctgatcggctccaagctgaccctcgccctgatcgaggccaagctccag
gagcaccgcatccgcccctacaccctggaggtggcggagggcaccagcgagcggatcggc
cccttcgactgcgaattcgtggcggtcaaccactcgatcccggacgcgctcgcggtcgcc
atccgtaccccggccggcatggtcgtgcacaccggcgacttcaagatggaccagctgccg
ctggacggccgcctcaccgacctgcgggccttcgcccggctcggcgaggagggcatcgac
ctgctgctgtcggactccaccaacgccgaggtccccggcttcgtctcccccgagcgggag
atctccggggtgctgcgccaggtcttcgcacgggccgacaagcggatcatcgtggcgagc
ttcgccagtcatgtgcaccgcatccagcagatcgtggacgccgcccaggaacacggccgc
aagatcgccttcgtgggccgttccatggtccgcaacatgggcatcgcgcgggacctgggc
tatctgcgggtcccgccgggcctggtggtggatgtgcgggcgctggacgatctcccggac
cgggacgtcgtgctggtgtgcaccggctcccagggcgagcccatggcagccctgtcccgg
atggccaaccgcgaccaccagatccgcatcgtcgagggcgacacggtcatcctggcctcc
tccctgatccccgggaacgagaacgcggtctaccgggtgatcaacggactgacccgctgg
ggcgccaacgtcgtccacaagggcaacgccaaggtccatgtgtccgggcacgcctcggcc
ggcgagctgttgtacttctacaacatctgcaagccgcggaacctgatgccggtgcacggc
gaatggcgccatctgcgcgccaacgccgaactcggcgcgctcaccggggtaccggccgac
cggatcgtgatcgccgaggacggcgtggtcgtcgacctggtcaagggcaaggcgaagatc
gtcggcaaggtccaggccggctatgtgtacgtggacggcctgtcggtcggcggcgtcacc
gagtccagcctgaaggaccggcggatcctgggggacgagggcttcatctccgtgttcgtg
gtggtcgacagcagcacgggcaagatcgtcagcggcccgagcatccatgcgcggggctcg
ggcatcgacgacgcggccttcgccgaggtcatcccgaagatcgacgaggtgctcgccaag
tccgcccaggacggcgtggtcgaggctcaccagttgcagcagctggtgcgccgcacggtg
ggcaagtgggtctccgacgtgtaccgccggcgcccgatgatcatgccggtcgtggtcgag
gtctga

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