KEGG   Streptomyces xiamenensis: SXIM_45140
Entry
SXIM_45140        CDS       T03904                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sxi  Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:sxi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sxi03400]
    SXIM_45140
Enzymes [BR:sxi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SXIM_45140
    5.6.2.6  RNA 3'-5' helicase
     SXIM_45140
DNA repair and recombination proteins [BR:sxi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SXIM_45140
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr WH2_Lhr DEAD Helicase_C AbiEi_4 DUF6406
Other DBs
NCBI-ProteinID: AKG45898
UniProt: A0A0F7FZ59
LinkDB
Position
complement(4837860..4842293)
AA seq 1477 aa
MLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEPEITVGIRSGDTPPTERRAMSRRP
PDILITTPESLFLMLTSAAREALAGVETVILDEVHAVAGTKRGAHLALSLERLDALLERP
ARRIGLSATVRPVDEVARFLSPRRRATIVQPPSGKQFQLSVVVPVPDLGELGGSPVPDAP
GSGEKPSIWPSVEERIVDLVRAHRSTIVFANSRRLAERLCNRMNEIAHERDTGTPLPEEH
SPADLMGGSGAAKGAPAVLARAHHGSVSKEQRSQIEEDLKAGRLPAVVATSSLELGIDMG
AVDLVIQVESPPSVASGLQRVGRAGHQVGAVSSGVVFPKYRGDLVQSAVVTERMRAGAIE
ALRVPANPLDVLAQQLVAMTALDTWDVDELLALVRGAAPFAALPESAFHSVLDMLAGRYP
SDAFAELRPRLVWDRVAHTVTGRPGAQRLAVTSGGTIPDRGLFGVFLAGSDPRKGGGRVG
ELDEEMVYESRVGDVFTLGTTSWRIEDITRDRVLVTPAPGVPGRLPFWKGDQLGRPLELG
RALGAFLREVGALEPAAARERLTAAGLDTWAVDNVLGYLDEQRRACGHVPDDRTIVVERF
RDELGDWRVVVHSPFGAQVHAPWALALGARLTERFGVDAQVLHADDGIVLRLPDIDLLGF
DPDGAAPDTGLDPARYAADDGQPPVTAADVLFEAGEVDDLVTEQVGGSALFAARFRECAA
RALLLPRRDPGRRTPLWQQRQRAAHLLSVASEFGSFPIVLEAVRECLQDVFDVPGLAELM
RDIAGRRVRLVEVTTREPSPFARSLLFGYVAQYLYEGDSPLAERRAAALSLDSRLLSELL
GKAELRELIDPGVLEELERELRWLTPERRLKDAEAVADALRVLGPLTDAELTERGAEPHW
AEQLEHARRALRVRIGGREHWAAVEDAGRLRDALGAALPVGVPEAFTDPVRDPLGDLLAR
HARTHGPFTSAHAAERFGLGTAVADGALHRLAAEGRLVQGEFHPQGRGQEWCDATVLRRL
RRRSLAVLRQELEPVPPTALAAFLPRWQHVGDPSGGGGGLRGIDGLLRAVEQLQGAPVPA
SALERLVLPSRVPGYGPQLLDELTTSGEVVWAGAGALPGKDGWVALYPADSAPLLLPPAH
PLELTPVHQAVLSALEGGYGLFFRQIADRVHQQWPDTPEPALAEAVWELAWSGRLTNDSL
APLRSLLGSGRTAGSTAHRARRSTPRGRYGSLAVAAGPGRRPPASRGGPPTVAGRWSLLP
PRESDPTVRAHALARTLLDRHGVVTRGAVSAEGVTGGFAAAYRVLSVFEESGQARRGYVV
EGLGAAQFAMEGAVDRLRAIATSGEHPGPGTAGKAVVLAAADPANAYGAALPWPEPPQDA
GHKPGRKAGALVVLVDGALVCYLERGGRSLLAWRDADDTEALRAAAGALAAAAGHGALGT
ITVERVNGTAVLSDPTWVRLLEEAGFHATPRGLRLRG
NT seq 4434 nt   +upstreamnt  +downstreamnt
gtgctgtacgtctccccgctcaaggccctggccgtcgacgtcgaacgcaacctgcgcagc
ccgctgaccggcatccggcaggaatccgtacgcctcggtctgccggagccggagatcaca
gtcggcatccgctccggggacaccccgcccaccgaacgccgcgccatgtcccgccgcccc
ccggacatcctgatcaccacccccgagtcgctgttcctgatgctgacctccgccgcccgc
gaggcgctcgccggcgtggagacggtgatcctggacgaggtgcacgcagtcgccggcacc
aagcgcggcgcccacctcgcgctctccctggaacggctcgacgccctgctggagcgcccc
gcccgccgcatcgggctgtccgccaccgtgcgccccgtcgacgaggtggcccgcttcctg
tccccgcgccgccgcgccaccatcgtgcagccgcccagcggcaaacagttccagctgtcc
gtggtcgtccccgtccccgacctcggcgagctcggcggctcccccgtccctgacgccccc
ggctccggcgagaagccctccatctggccctccgtcgaggagcgcatcgtcgacctggtg
cgggcgcaccgttccaccatcgtcttcgccaactcccggcggctggccgagcggctgtgc
aaccggatgaacgagatcgcccacgagcgcgacaccggcaccccgctccccgaggaacac
tcccccgccgacctgatgggcggctcgggcgccgcgaagggcgcccccgccgtcctcgcc
cgcgcgcaccacggctcggtctccaaggagcagcgctcccagatcgaggaggacctcaag
gccggccggctgcccgcggtcgtcgccacctcctcgctggaactgggcatcgacatgggc
gccgtcgacctggtcatccaggtggagtccccgccctcggtggcctccgggctccagcgc
gtgggccgcgcgggacaccaggtgggggcggtctcctccggcgtggtcttccccaagtac
cggggtgacctggtgcagtcggcggtggtcaccgaacggatgcgggccggtgccatcgag
gccctgcgtgtcccggccaacccgctcgacgtcctggcccagcagctggtcgcgatgacc
gccctggacacctgggacgtggacgaactgctcgcgctggtccgcggcgccgccccgttc
gccgcgctgcccgaatcggccttccactcggtcctcgacatgctcgccggccgctacccc
tcggacgccttcgccgagctgcggccccgcctggtgtgggaccgggtggcgcacacggtc
accggccgccccggcgcccagcggctggccgtgacctccggcggcaccatccccgaccgc
ggcctgttcggggtgttcctggcgggctccgatccgcgcaagggcggcggccgggtcggg
gagctggacgaggagatggtgtacgagtcgcgggtcggcgacgtgttcaccctcggcacc
acctcctggcggatcgaggacatcacccgggaccgggtgctggtcaccccggcgcccggg
gtgccggggcggctgccgttctggaagggtgaccagctgggccgcccgctggagctcggc
cgcgccctcggcgcgttcctgcgcgaggtcggcgccctggagcccgccgcggccagggaa
cggctgaccgcggccggcctggacacctgggcggtggacaacgtcctcggctacctggac
gagcagcgccgggcgtgcgggcacgtccccgacgaccgcaccatcgtggtggagcggttc
cgcgacgaactgggcgactggcgggtggtggtgcactcccccttcggcgcgcaggtgcac
gccccctgggccctggctctcggcgcccggctcaccgaacgcttcggcgtggacgcccag
gtgctgcacgcggacgacggcatcgtgctgcggctgcccgacatcgatctgctgggcttc
gacccggacggggccgcacccgacaccggtctcgaccccgcgcggtacgcggcggacgac
ggacagcccccggtcaccgccgccgatgtgctcttcgaggcgggcgaggtcgatgacctc
gtcaccgaacaggtcggcggctccgcactgttcgccgcccggttccgcgagtgcgcggcc
cgcgccctgctgctgccgcgccgcgatcccggccgccgtaccccgctgtggcagcagcgc
cagcgcgccgcccatctgctctcggtcgccagcgagttcggctcgttcccgatcgtcctg
gaagccgtgcgcgaatgcctgcaggatgtcttcgacgtgccggggctcgccgagctgatg
cgcgacatcgccggccgccgggtccgcctggtggaggtcaccacccgcgaaccctcgccc
ttcgcccgctccctgctgttcgggtacgtggcgcagtacctgtacgagggcgactcgccg
ctggccgaacgccgcgccgccgccctctcgctggactcccggctgctgtccgaactgctc
ggcaaggcggagctgcgcgagctgatcgaccccggcgtcctggaggagctggagcgcgaa
ctgcgctggctgaccccggaacggcggctgaaggacgccgaggccgtcgccgacgcgctg
cgcgtcctgggcccgctgaccgacgccgagctgaccgaacgcggcgcggaaccgcactgg
gccgagcagttggagcacgcccgccgcgccctgcgagtacgcatcggcggccgggagcac
tgggcggccgtcgaggacgccggacggctgcgggacgccctgggtgcggccctcccggtg
ggggtgcccgaggcgttcaccgatccggtgcgcgatccgctgggtgacctgctggcccgc
cacgcccgtacccacggccccttcacctccgcgcacgccgccgaacggttcgggctgggc
accgccgtagccgacggcgccctgcaccggctggcggccgaggggcggctggtccagggc
gagttccacccccaggggcggggccaggagtggtgcgacgcgacggtgctgcgccggctg
cggcgccgctcgctggccgtgctgcgccaggagctggagcccgtgccgccgaccgcgctg
gccgccttcctgccgcgctggcagcacgtcggcgacccgtcgggcggcgggggcggactg
cgcggcatcgacggactgctgcgcgccgtggaacagctgcagggcgcgccggtgccggcc
tccgccctggaacggctggtactgccctcccgggtacccgggtacggcccgcagctgctc
gacgagctgaccacctccggcgaggtggtctgggcgggcgccggggcgctgcccggcaag
gacggctgggtggcgctgtacccggccgacagcgccccgctgctgctgcctcccgcgcac
ccgctggagctgaccccggttcaccaggcggtgctgtcggccctggagggcggctacggg
ctgttcttccggcagatcgccgaccgggtccaccagcagtggcccgacacaccggaaccc
gcgctggccgaggccgtgtgggagctggcctggtccgggcggctgaccaatgactcgctg
gccccgctgcggtcactgctgggttcggggcgcacggcgggatccaccgcccaccgggcc
cggcgcagcaccccgcgtggccggtacggctccctggcggtggcggccggccccggccgc
agaccgccggcctcccgtggcggaccacccaccgtggcgggccgctggtcgctgctgccg
ccccgggagagcgatccgacggtccgcgcgcacgccctggcccgtacgctgctcgaccgg
cacggggtggtgacccggggcgcggtgtccgccgaaggggtgacgggcggcttcgcggcc
gcctaccgggtgctgtcggtgttcgaggagagcgggcaggcgcggcgcggctacgtggtg
gagggactgggcgccgcccagttcgcgatggagggggcggtggaccggctgcgggcgatc
gccacctccggggaacacccgggccccggtacggcgggcaaggcggtggtgctggccgcg
gccgaccctgccaacgcctacggcgccgcgctgccgtggcctgagcccccgcaggacgcc
ggccacaagccgggccgcaaggcgggcgccctggtcgtcctcgtcgacggcgccctggtg
tgctacctggagcgcggcggccgctccctgctcgcctggcgggacgcggacgatacggag
gccctgcgggcggcggccggggcgctggctgcggcggccgggcacggcgcgctgggcacc
atcacggtggaacgggtcaacggcacggccgtgctgtcggaccccacctgggtgcggctg
ctggaggaggcgggcttccacgccaccccgcgcggattgcggctgcgcggttga

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