Streptomyces xiamenensis: SXIM_52990
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Entry
SXIM_52990 CDS
T03904
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sxi
Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxi03400
]
SXIM_52990
DNA repair and recombination proteins [BR:
sxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SXIM_52990
Archaeal homologous recombinant proteins
SXIM_52990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AKG46683
UniProt:
A0A0F7G0D5
LinkDB
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Position
5757278..5758459
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AA seq
393 aa
AA seq
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MYGEIGAGWVRFLHTSDWHLGRGLHRVPLIEAQRVFLDHLVETARQHEVDAVLVAGDIYD
RAVPPLVAVELFDRVLRQLAGAGIPAVMISGNHDSARRLGVGAGLMDGAGVHLRTDPEEC
ATPVLLRDTHGEVAVYGLPYLEPQLVREQFAVETARHSAVLGAAMRRVREDLARRPAGTR
AVVLAHAFVTGGATSDSERDITAGGAASVPASLFDGVHYAALGHLHGCQTLTERVRYSGS
PLAYSFSEAGHRKSMWLIDLDAAGEVRGERVDCPVPRPLARITGRLEDLLADPSLERHRE
HWVEATLTDPARPPEPMARLSARFPHLLALAFAPEQAAREGRRSYAERLRGRDDQRIAED
FIAHVRPGQAPDAQERAELRRALEAARVGERNA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgtacggagagatcggagcgggctgggtgaggtttctgcacacctccgactggcatctg
gggcgggggctgcaccgggtgccgttgatcgaggcgcagcgggtgtttctcgaccatctg
gtggagaccgcccggcagcacgaggtggacgcggtgctcgtcgcgggggacatctacgac
cgggccgtgccgccgctggtcgccgtggagctgttcgaccgcgtgctgcggcagttggcc
ggggcggggattcccgccgtcatgatctccggcaaccacgactcggccaggagactgggc
gtcggcgccgggctgatggatggcgccggggtgcatctgcggaccgaccccgaggagtgc
gccacccccgtcctgctgcgggacacccacggcgaggtcgccgtgtacgggctgccgtat
ctggaaccgcagctggtgcgcgagcagttcgcggtggagaccgcccggcacagcgccgtg
ctcggggccgccatgcggcgggtgcgcgaggatctcgcccgccggccggccgggacgcgt
gccgtcgtgctcgcccacgccttcgtcaccggcggcgcgacctccgacagcgaacgcgac
atcaccgcgggcggtgccgcttccgtgcccgcctcactcttcgacggcgtgcactacgcg
gcactcggccatctgcacggctgccagacgctcaccgagcgggtgcggtactcgggctcc
ccgctcgcgtactccttctccgaggccggccaccgcaagtccatgtggctcatcgacctc
gacgccgccggcgaggtgcgcggcgagcgcgtggactgccccgtgccccgtccgctggcc
aggatcaccgggcggctggaggacctgctggcggacccctcgctggagcggcaccgcgag
cactgggtcgaggccaccctgaccgaccccgcccggccccccgagcccatggcccggctc
tccgcccgcttcccgcatctcctcgccctcgccttcgcccccgaacaggccgcccgcgag
ggccgccgcagttacgccgagcggctgcgcggccgcgacgaccagcggatcgccgaggac
ttcatcgcccacgtacggcccgggcaggcacccgacgcacaggaacgcgccgagctgcgg
cgcgccctggaggcggcccgggtgggggagaggaacgcatga
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