Staphylococcus xylosus SMQ-121: SXYLSMQ121_0056
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Entry
SXYLSMQ121_0056 CDS
T03311
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_0056
Enzymes [BR:
sxl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SXYLSMQ121_0056
DNA repair and recombination proteins [BR:
sxl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SXYLSMQ121_0056
Prokaryotic type
SXYLSMQ121_0056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AID41489
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All DBs
Position
71464..72837
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AA seq
457 aa
AA seq
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MHLGVILNRVFRTKDNPLFQYIVKHHNEINKLYFILPLEDLTDASEVKRDYYHKVVKGFV
NALDKHDIQPHIVTYEKLGELAETLALSHVLVAKDIMSYHKEIYDYPHVKKAFENHQVTV
IGQRVNHYFEPTKTFNKQQQPYKVFTSFYKANRQDLAHTPKKSYQFKQLSQIAEKGSNQS
DLKFENNKDIEKLARKAWADFLNGDIADYDKLTDDVSQDFVSGLGKYLAYGLLDIREIIN
DLLEDYESDEKNYEAFIREVIFREFYYVLMTQYPETATKSFSEKYRNMQWSYNKTHFEVW
KKGQTGYPIVDAAMKKLNRTGYMHNRLRMVVSQFLTKNLFIDWTWGEEYFRQYLIDYDNA
SNVHGWQWSASTGTDAVPYFRMFNPIRQSERFDAQGYFIKTQLEIFNDVSSKYIHDPTKY
KDKLQEIYHIEIGKDYPQTIVNHKNSRDYVMDKFKQL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaggagtcatacttaacagagtttttagaacgaaagataatccactttttcaa
tatatagtgaagcatcacaatgagataaataaattgtattttatcttacctttagaagat
ttaactgacgcatcagaagtaaaacgtgactattaccataaagttgtaaaaggatttgta
aatgctttagataagcatgatatacaacctcatattgtcacatatgaaaagctaggtgaa
ttagccgaaacattggcgttatctcacgtattagtagcaaaagatattatgagttatcac
aaagaaatatatgactatcctcatgtaaaaaaggcttttgaaaatcaccaagttacagta
attggacaacgcgtgaatcattattttgagccaacaaagacttttaataaacagcaacag
ccttataaagtatttactagtttttataaagcaaatcgtcaggatttagcacacacccct
aaaaaaagttatcaatttaagcagttgtctcaaattgcggaaaagggttcaaatcaaagt
gacttaaaatttgaaaataataaagatatagaaaagttagcgcgtaaagcttgggctgat
tttttaaatggtgacatagctgattatgataaattgactgacgatgtgtcgcaggatttt
gtaagtggattaggtaaatatttagcatatggactactcgatattcgtgaaattataaat
gatttacttgaagattatgagagcgatgaaaaaaattatgaagcttttataagagaggtt
atattccgtgaattttattatgtgttaatgacacagtatccagaaacggcaactaaatct
ttttctgaaaagtatcgaaacatgcaatggtcgtataataaaacacattttgaagtatgg
aaaaaaggtcaaactggctacccaatcgttgatgctgcaatgaagaagctgaatcgtaca
ggctatatgcataatcgcttacgaatggtcgtatcacaatttttaacgaaaaatttattt
attgattggacttggggtgaggagtactttagacagtatttgatagattatgataatgca
tctaatgtacatggatggcagtggtcggcatcaaccggaacagatgcagtgccttatttc
agaatgtttaatcctatacgtcaaagtgagcgctttgatgcgcaagggtattttattaaa
acacagctagaaatatttaatgatgtgagcagtaaatacattcatgatccaactaaatat
aaagacaagttacaagaaatttatcatattgaaattggaaaagattatccacagactatc
gtgaatcataaaaatagtagagattatgttatggataaatttaagcaattatga
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