Staphylococcus xylosus SMQ-121: SXYLSMQ121_0923
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Entry
SXYLSMQ121_0923 CDS
T03311
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03420
Nucleotide excision repair
sxl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SXYLSMQ121_0923
03430 Mismatch repair
SXYLSMQ121_0923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_0923
Enzymes [BR:
sxl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SXYLSMQ121_0923
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SXYLSMQ121_0923
MMR (mismatch excision repair)
Other MMR factors
SXYLSMQ121_0923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AID42354
UniProt:
A0A5R9AZK3
LinkDB
All DBs
Position
1010019..1012229
Genome browser
AA seq
736 aa
AA seq
DB search
MNALVNKMNDEQSQAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKGVSPYNVLAITF
TNKAAKEMKARVQTLVGEQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPEDAQKEANDYHTQMVATVYKGYQRQL
SRNEALDFDDLIMVTIRLFERVPEVLDYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKNILNAANEVIKNNS
ERKPKGLWTGNTDGDKIHYYEATTERDEAEYVVREIMKHQRNGKKYQDMAILYRTNAQSR
VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLRRVINIPKRGIGPS
SVDKIQAYAVQNDLSMFDALAEVDFIGLSKKVTQECITFYDMMQNIIKQQEFLEITEIVN
EVLEKSGYREMLEREQTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVAD
IDEAQIEDGITLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSDDEHEMQEERRICYVA
ITRAEETLYLTHATSRMLFGRPQSNMASRFLREIPEDLLENESKRKSSSQSKGNSFQSAT
KQPAKRSHSQKTTSSRKTQSTTNWNVGDKVMHKSWGEGMVSNVKEKNGSVELDIIFKSEG
PKRLLAQFAPIEKKGE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcattagttaataaaatgaatgatgaacaaagccaggcagtacgtacaacagag
ggcccattacttataatggcaggcgcgggttcaggtaaaacgcgtgtcttaacacaccgt
attgcttatttgttagatgaaaaaggagtgtctccgtataatgttttagcgattactttt
acaaataaagcagctaaggaaatgaaagcacgtgtccaaactttagttggtgaacaagct
gaagttatttggatgtcaacattccactcaatgtgtgtgagaattcttagaagagacgca
gatcgtatcggtattgagagaaactttacgattattgatccgactgaccaaaaatcagtt
attaaagatgttttgaaaaatgaaaatatagatagtaagaaatttgaacctagaatgttt
ataggtgcaattagcaatttaaaaaatgaattaaagacacctgaggatgcgcaaaaagaa
gcgaatgactaccatactcaaatggttgcgactgtatacaaaggttaccaacgtcaactt
tcaagaaatgaagcgttagactttgatgatttaattatggtcacaattcgattatttgaa
cgtgttccagaagtattagattattaccaaaacaaattccaatacatccatgtggatgaa
tatcaagatacgaataaggcgcaatacacattggtgaaattattagcatcaaaattcaaa
aatttatgtgtagtaggggattccgaccaatcaatttacggttggcgtggtgcagatatc
caaaacatcttatcatttgaagaagattatcctgaggcaaaaacaattttcttagaacaa
aattatcgttctactaaaaacatattaaatgcagcaaatgaagttattaaaaataattca
gagcgtaaacctaagggattatggacaggcaatacagatggcgataaaatccattactat
gaagcaacaactgaacgcgatgaagcagaatatgtcgtacgtgaaatcatgaaacatcaa
cgaaatggtaagaaatatcaagatatggcaattttatatcgtaccaatgcacaatcacgt
gtactggaagaaacttttatgaaatctaatattccttatactatggttgggggtcaaaag
ttctacgatagaaaagaaattaaagatttattaagttatttaagaataattgcaaacagt
aatgatgatattagcttacgtcgtgttatcaatattcctaaacgtggtattggtccatct
tcagtagataaaattcaagcctatgccgttcaaaatgatttgagcatgtttgatgcgtta
gcagaagttgattttattggtttatcaaaaaaagtaacacaagaatgtattactttttac
gatatgatgcaaaacatcatcaaacaacaagagtttttagaaattacagagattgtaaat
gaagtattagaaaaatcaggttatcgtgaaatgctagaacgtgagcaaacgttagaatct
agaagtagattagaaaatattgacgagtttatgtctgtaccaaaagattatgaagaaaat
actccgttagaagaacaatccttgataaacttccttactgacctgtcattagttgctgat
atagatgaagcgcaaattgaagacggtataacgttgatgacaatgcactctgctaaaggt
ttagaattcccaattgtttttataatgggtatggaagaatcactatttccacatattaga
gcgattaaaagcgatgatgagcatgaaatgcaagaagaaagacgtatttgttatgttgct
attacacgtgcagaagaaacattatacttaacacatgctacatctagaatgttatttggt
agaccacagtctaatatggcatctcgattcttaagagagattcctgaagatttattagaa
aatgaatctaagcgtaagtctagttctcaaagtaaagggaatagtttccaatcagctaca
aaacaaccagctaagagatcacatagtcaaaagactactagttcaagaaagactcaatca
acaactaattggaatgttggtgataaagtgatgcataaatcatggggtgagggtatggtt
agtaatgtgaaggaaaaaaatggctcagtagaattagatattatctttaaatcagaagga
ccgaaacgtttattagcacagtttgcaccaattgagaagaagggggagtaa
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