Staphylococcus xylosus SMQ-121: SXYLSMQ121_0935
Help
Entry
SXYLSMQ121_0935 CDS
T03311
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03030
DNA replication
sxl03430
Mismatch repair
sxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SXYLSMQ121_0935
03430 Mismatch repair
SXYLSMQ121_0935
03440 Homologous recombination
SXYLSMQ121_0935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxl03032
]
SXYLSMQ121_0935
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_0935
Enzymes [BR:
sxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SXYLSMQ121_0935
DNA replication proteins [BR:
sxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SXYLSMQ121_0935
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SXYLSMQ121_0935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AID42366
UniProt:
A0A5R9AZK5
LinkDB
All DBs
Position
complement(1025482..1026036)
Genome browser
AA seq
184 aa
AA seq
DB search
MNSDAFIALDFETANGKRTSICSVGMVKVVNHQITETFYTLINPNDFFSQQNIAVHGIHP
EEVADAPTFKTVYPYMLKFIDDLPVVAHNAAFDMTVLHESIRSLGIETPCMTYFCSLQLS
RRTIHHHRYGLNYMMQYYNLDFHGHHDALNDAKACAMITFRLLKHYDNLSSMLKVYGKDL
RDKD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagatgcctttattgctctagattttgaaactgcaaatgggaaacgtacgagt
atttgttcagttgggatggttaaagttgttaaccatcaaataacagaaacattttatacc
ctcattaatcctaatgacttcttttcacaacaaaatattgcagtacatggtattcatccc
gaggaagttgcagacgctcctacttttaaaactgtgtacccatacatgttaaaatttata
gatgatttaccagtagtagctcataatgcagcttttgatatgactgttttacatgaaagt
attagatcattaggaattgaaacgccatgcatgacttatttttgttcacttcaattatct
cgaagaacaattcatcatcaccgttatggtttgaactatatgatgcaatattacaactta
gactttcatggacatcacgatgcccttaacgatgctaaagcttgtgctatgattacattt
agacttttaaaacactatgacaatttatcaagtatgcttaaggtatacggtaaagacctt
agagataaagactaa
DBGET
integrated database retrieval system
