Staphylococcus xylosus SMQ-121: SXYLSMQ121_1114
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Entry
SXYLSMQ121_1114 CDS
T03311
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03030
DNA replication
sxl03410
Base excision repair
sxl03420
Nucleotide excision repair
sxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SXYLSMQ121_1114
03410 Base excision repair
SXYLSMQ121_1114
03420 Nucleotide excision repair
SXYLSMQ121_1114
03440 Homologous recombination
SXYLSMQ121_1114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxl03032
]
SXYLSMQ121_1114
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_1114
Enzymes [BR:
sxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SXYLSMQ121_1114
DNA replication proteins [BR:
sxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SXYLSMQ121_1114
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SXYLSMQ121_1114
NER (nucleotide excision repair)
GGR (global genome repair) factors
SXYLSMQ121_1114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
WHD_BrxR
HHH_2
DUF1949
Motif
Other DBs
NCBI-ProteinID:
AID42545
LinkDB
All DBs
Position
1227060..1229690
Genome browser
AA seq
876 aa
AA seq
DB search
MNKLILIDGNSLSFRAFYALPLLQNKAGIHTNAVYGFAMLLEKIIKEEQPTHFLVAFDAG
KTTFRHDKYSEYKGGRQKTPPELTEQFPYVRQLLDAYQIKRYELENYEADDIIGTLSKEA
DNAHFETIIVTGDRDLTQLATDDVTIYYTKKGVTDVDHYTPDFIAEKYDGLVPNQIIDMK
GLMGDASDNIPGVAGVGEKTAIKLLKQFSTVENVYEHLDEVSGKKLKEKLENSKDDALMS
KELATINCASPIEVSLEDTMLPENPDTSAKIDLFKKLEFKQLLEQIDVDGTHSTAEEKEL
NVESDFKNIDFKSLTSATIHFELDGSNYLKDDILKFALFADEHHVVVDAANIHDYPELIA
WLEDDTTEKNVYDAKKTYIVAHRLEISISNIIFDVMLASYIIDPSRAIDDVNSVVSNYGQ
HYVQQSVEVYGKGKKRHLPEDDVLNHYVATVIEAINQVKPIMQEQLIEYNQTNLLDNLEL
PLARILSEMEETGIYTVANDLEEMEKEIQTKLDVLIDNIYQAAGESFNINSPKQLGVVLF
ETLKLPVIKKTKTGYSTAVDVLEQLQGQHPIIEYILEYRQLAKLQSTYVEGLQKVISADN
RIHTRFNQTLAQTGRLSSIDPNLQNIPVRLEEGRKIRKAFKSSDENSVIFSADYSQIELR
VLAHITQDESMKQAFINDDDIHTATAMKVFGVEPDEVDGMMRRQAKAVNFGIVYGISDYG
LSQSLGITRKQAKQFIDDYLDSFPGVKQYMEDIVKDCKAQGYVETLLHRRRYIPDITSRN
FNLRGFAERTAMNTPIQGSAADIIKLAMVNFDKEIKNTDFHAKLLLQVHDELIFELPKDE
VEAFSEFIEDIMDNALELDVPLKVESNYGATWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattaattctaattgatggtaatagccttagctttagagccttttatgcttta
ccactattacaaaataaagcaggtatacacactaatgctgtgtatggatttgcaatgtta
ctagaaaaaataatcaaagaagaacagcctacacattttcttgttgcgtttgatgcagga
aagactacatttagacatgataaatatagtgagtataaaggggggcgtcaaaaaacgcca
cccgagctgactgagcaatttccttatgtaagacagttattggatgcttatcaaattaag
agatatgaattagaaaactatgaagcagatgatattatagggacattaagtaaagaagct
gacaacgcacactttgagactattatcgttacaggcgatagagacttaacacaattggca
acggatgatgttacaatttattatactaaaaaaggtgtgacagacgttgatcattacaca
cctgattttattgcggaaaagtatgacggcttagttccaaatcaaatcatagatatgaaa
ggtttgatgggggatgcatcagataacataccaggtgtagctggagttggtgaaaaaact
gcaattaaattattaaaacaattttcaactgtggaaaatgtttatgaacatttggatgaa
gtttctggtaagaaattgaaagaaaaactagaaaatagtaaagatgatgcattgatgagt
aaagaacttgcaactattaattgtgcgagtcctattgaagtatcacttgaagatacaatg
ttgccagaaaatccagatacttcagctaaaattgatttgtttaaaaaattagaatttaag
caattgcttgaacaaatagacgtagatggcacacattctacagctgaagagaaagaatta
aatgtagaatctgattttaaaaacattgactttaaatctttaacttctgcaactatacat
tttgaattagatgggtccaattatttgaaagatgatattttgaaatttgcattgtttgca
gatgaacaccatgttgttgttgatgcagcaaatattcatgactatcctgaacttatagct
tggttagaagatgacacaacagaaaaaaatgtttatgatgctaaaaagacatatattgtt
gcgcacagattggaaatatcgatttcaaacattatttttgacgtgatgcttgcaagttat
attatcgacccatctcgagctattgacgatgtgaactctgtagttagcaattacggtcaa
cactatgttcaacaaagtgttgaagtatatggcaaggggaaaaagagacatttacctgaa
gatgatgttttaaatcattatgttgcaacagtgatagaagcaattaatcaagttaaacca
atcatgcaagaacaattaatcgaatataaccagacgaacctgttagataatttagaacta
ccactagcgcgaatattaagtgaaatggaagaaacagggatttatacggttgctaatgat
ttagaagaaatggaaaaagaaattcaaactaaattagatgtattgattgacaatatttat
caagctgcaggagaatctttcaatattaattctccaaagcaattaggtgtcgtgttgttt
gaaacattaaaattaccggtaatcaagaaaacaaaaacaggatattctactgcagtagat
gtacttgaacaattacaaggacaacatccaattattgaatatatactagagtatagacaa
cttgcaaagttacaatctacttatgttgaaggtttacaaaaggtaataagtgctgataac
cgcatccatacaaggtttaatcaaacgttagcgcaaacgggtagattatcgtctatcgat
ccaaatttacaaaacatccctgttcgcttagaagaaggaagaaaaataagaaaagcattt
aaatctagtgatgagaacagtgttatattttctgcagattactctcaaatagaactccga
gtgttagctcatatcacacaagatgaaagtatgaaacaagcatttataaatgatgatgat
attcatacggcgacagcgatgaaagtatttggtgtagaacctgatgaagtagacggtatg
atgcgtagacaagctaaagcagttaattttggtattgtttatggtattagtgattatggt
ttgagccaaagtttaggaatcacacggaaacaagctaaacaatttattgatgactattta
gatagttttcctggcgtaaaacaatatatggaggatatcgtcaaagactgtaaagcacaa
ggctatgtagaaaccttgttacatcgtcgtagatatattccagatataacaagtagaaat
ttcaatttgcgtggatttgctgagagaactgcaatgaatacgcccattcaaggtagtgct
gctgatataattaaattagctatggttaactttgacaaagaaattaagaatacagatttt
cacgcaaaattattattgcaagtacacgatgaattgatttttgaattaccgaaagatgaa
gtggaagcattcagtgaatttatagaagatatcatggataacgcccttgaactagatgtt
ccattaaaagtagaatctaattatggcgctacatggtatgacgcaaaatag
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