Staphylococcus xylosus SMQ-121: SXYLSMQ121_1115
Help
Entry
SXYLSMQ121_1115 CDS
T03311
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SXYLSMQ121_1115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_1115
Enzymes [BR:
sxl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SXYLSMQ121_1115
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SXYLSMQ121_1115
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SXYLSMQ121_1115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TraI_2B
DZR
Deam_C
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AID42546
UniProt:
A0A5R9B5Z4
LinkDB
All DBs
Position
1229706..1230578
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIQPFATGQKIESVIFSEKVKEGKASQRETIIKGMALDTFQKFTEQYV
IKEIERRSKYIVFYLEKGEEERILISHLGMAGGFFIVDKIEDISVPNYRKHWHVIFKLDN
DKLLVYSDIRRFGEIRNVPDFQAYPSFLEIAPEPFEKDAKSHYLAWFDKKMYQNKPIKQM
ILDHRVISGCGNIYACEALFRAGIHPARLSKSLNNQERDILFYYVRDVLESGIKYGGTSI
SDYRHADGSTGTMQLHLNVYKQKVCKVCGSDIETQVIATRNSHYCPTCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactcccagaagtagaacatgtaaaaagaggtattcaaccgtttgctaccggc
caaaaaattgaatctgttatcttttccgagaaagttaaagaaggtaaggcgagccaacgt
gaaaccataattaaaggtatggcattagatacattccaaaaattcacggaacaatatgtg
attaaagagattgaacgccgtagtaaatatatcgtgttttaccttgaaaaaggtgaagag
gagagaatacttatcagtcatttaggtatggctggtggattctttatagttgataaaata
gaagatattagtgtgccgaattatagaaagcattggcatgttatatttaaattagataat
gataaattgctagtttattcagatattagacgatttggagaaattaggaatgtacctgat
tttcaggcgtatccttcatttttagaaattgcgccagaaccttttgagaaagatgcaaag
agtcattatttagcttggtttgataaaaagatgtatcaaaataagcctattaaacaaatg
attttagatcatagagtgatttcaggatgtggtaacatttatgcgtgtgaagcactattt
agagcgggtatacatccagcgcgattatctaaatctttaaataaccaagagcgcgacata
ttattttattatgttcgagatgtgttagaatcgggtataaaatatggtggaacgagcatc
tccgactaccgtcatgcagatggtagtaccggaacgatgcaactacatcttaatgtttat
aaacaaaaggtttgtaaggtttgtggaagtgacatagaaactcaagtaattgcaactaga
aacagtcattactgccctacttgccaaaaataa
DBGET
integrated database retrieval system
