Staphylococcus xylosus SMQ-121: SXYLSMQ121_1207
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Entry
SXYLSMQ121_1207 CDS
T03311
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03030
DNA replication
sxl03430
Mismatch repair
sxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SXYLSMQ121_1207
03430 Mismatch repair
SXYLSMQ121_1207
03440 Homologous recombination
SXYLSMQ121_1207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxl03032
]
SXYLSMQ121_1207
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_1207
Enzymes [BR:
sxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SXYLSMQ121_1207
DNA replication proteins [BR:
sxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SXYLSMQ121_1207
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SXYLSMQ121_1207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF1456
DisA-linker
SANT_DAMP1_like
YtxK_like
Sigma54_activ_2
DUF1451
Motif
Other DBs
NCBI-ProteinID:
AID42638
UniProt:
A0A5R9B8B6
LinkDB
All DBs
Position
1323411..1324385
Genome browser
AA seq
324 aa
AA seq
DB search
MSDKIITIYGEVPELIEKKSAEVINRYLNAPKDDFNFVKYNLYESDLSPIIEETLTLPFF
SDKKAVLVQNAYVFTGEKPPKDLSHNTDQLIEFIEKYDGETLIIFEVYQSKLDERKKLVK
TLKKQANLIKIEQMTEEEIKKWIKNELHENYKDIKQDALDLFLELTGINFNIVKQELEKV
ILFLGDRATINKQDVHQIVNRSLEQNVFLLTDYIQKNKKSQAIQLVKDLIAMKEEPIKLL
ALITSNYRLFYQCKILGQKGYSGQQIAKTINVHPYRVKLALNQSRNYQLEKLLNIIDTCA
ETDYKLKSSYMDKQLILELFILSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaaattattacaatttacggtgaagtacctgaacttattgaaaaaaagtca
gctgaagttattaaccgttacttgaatgcccctaaagatgattttaactttgttaaatat
aatttatatgaaagtgatttatctcctataattgaggaaacattgactttaccatttttt
tctgacaaaaaagcagtattagttcaaaatgcttatgtgtttacaggcgaaaaaccgcca
aaagacctaagtcataatactgaccaacttattgaatttattgaaaaatatgacggtgaa
actttaataatatttgaagtctatcaatcaaaattagatgaaagaaaaaagttagttaaa
acattgaagaaacaggctaatttaatcaaaattgaacaaatgaccgaagaagagataaaa
aaatggataaagaatgaacttcacgaaaattacaaagatataaaacaagatgcattagat
ttatttttagaacttacgggtattaattttaatattgtaaagcaagaacttgaaaaagta
atactatttttaggtgatagagctacgattaataagcaagatgtacatcaaattgttaat
agaagtttagagcaaaatgtctttttattaactgattatattcagaaaaacaaaaaatca
caagctatacaattggtgaaagatttgatagcaatgaaagaagaaccaattaaattatta
gcattaattacaagtaattatcggttgttttatcaatgtaaaatattaggacaaaaaggt
tacagtggtcaacaaatagctaaaacaatcaatgtacatccatatcgtgttaaattggct
ttgaatcaatcaaggaattatcaactagaaaaattattaaatataattgatacatgtgca
gaaacagattataaattgaagtcatcatatatggataaacaattaattttagaactgttt
attttatcactttaa
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