Staphylococcus xylosus SMQ-121: SXYLSMQ121_1530
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Entry
SXYLSMQ121_1530 CDS
T03311
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SXYLSMQ121_1530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxl03019
]
SXYLSMQ121_1530
03016 Transfer RNA biogenesis [BR:
sxl03016
]
SXYLSMQ121_1530
Enzymes [BR:
sxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SXYLSMQ121_1530
Messenger RNA biogenesis [BR:
sxl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SXYLSMQ121_1530
Transfer RNA biogenesis [BR:
sxl03016
]
Prokaryotic type
tRNA degradation factors
SXYLSMQ121_1530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
OB_PDCD11
KH_2
S1_RRP5
SPATA25
DUF2461
ACBP4_C
Csc2
Motif
Other DBs
NCBI-ProteinID:
AID42961
UniProt:
A0A5R9B6Y9
LinkDB
All DBs
Position
complement(1657570..1659663)
Genome browser
AA seq
697 aa
AA seq
DB search
MSQEKKVFKTEWANRSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLM
VNYEEKMYAAGKIPGGFKKREGRPSDEATLTARLIDRPIRPLFPKGYKYDVQIMNTVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGEYIINPTVAQKEVSRLDLEVA
GHKDAVNMVEAGASEITESEMLEGIFFGHSEIQRLVNFQQEIVDHIQPEKKAFVPVEKDE
TLVEKVTQLTEANGLKDAVLTFDKQQRDINLDNLKEKVAAEFIDETDADNEALIKEVNSI
LNDLVKEEVRRLIAEEKIRPDGRKTDEIRPLESEVGVLPRAHGSGLFTRGQTQALSVLTL
GSMSEYQILDGLGEEEQKRFMHHYNFPNYSVGETGPVRSPGRREIGHGALGERALSHIIP
DVKDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDSYT
ILTDIQGMEDALGDMDFKVAGTSEGITAIQMDIKIDGLTKEIIKEALEQARVGRLAILDH
MLQTIDTPRNELSAFAPKVVTMTIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDKNAIDQARKIIEDITREAEVGQVYEGKVKRIEKYGAFVELFPGKDALVHISQIAN
ERIEKVEDVLKVGDTFKIKVTEIDKQGRVNASHKVLL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagaaaaaagtttttaaaactgaatgggcaaacagatcattgacgattgaa
actggtcaacttgctaaacaagccaatggtgctgtactcgttcgttatggtgatacagtt
gtcttatcaactgcggttgcttcaaaagaaccgcgtgatggtgacttcttcccattaatg
gttaactatgaagaaaaaatgtatgctgctggtaaaatcccaggcggattcaaaaaacgt
gaaggtcgcccaagtgatgaagcgacgttaactgcgcgtttaatcgatagaccaattcgt
ccattattccctaaaggttataagtatgacgttcaaatcatgaatacggtattaagtgca
gaccctgattgttctcctgaaatggcagcaatgataggttcatcaatggcattaagtgtt
tctgacattccgttccaagggccaattgctggtgtgaatgttggttatattgatggagag
tacattatcaatccaacagttgcacaaaaagaagtgtcacgtttagatttagaagttgcc
ggtcataaagatgctgtaaacatggttgaagccggagctagtgaaataactgaaagtgaa
atgttagagggtattttctttggacatagtgaaattcaacgtttagttaatttccaacaa
gaaattgttgatcatattcaaccagagaagaaagcatttgttcctgttgaaaaagatgaa
acacttgtagaaaaagttactcaattgactgaagcgaacggtttgaaagatgctgtttta
acatttgataaacaacaacgtgatattaacttagataatttaaaagaaaaagttgcagct
gaatttatcgatgaaactgatgctgacaatgaagcgttaattaaagaagttaatagcatt
ttaaatgatttagtcaaagaagaagtaagaagattaattgcagaagaaaaaatcagacca
gatggccgtaagacggatgaaattcgtccacttgaatctgaggttggtgtattaccgaga
gcacatggttcgggattatttacacgcggacaaacacaagcactttcagtattaacattg
ggctctatgagcgaatatcaaattcttgacggtttaggtgaagaagaacaaaaacgcttt
atgcatcattataatttccctaactattcagtaggtgaaacaggacctgtacgttctcca
ggacgtcgtgaaatcggccatggtgctttaggtgaacgcgcactaagccatattatccct
gatgtaaaagatttcccttatactgtgagaattgtaagtgaagtcttagaatcaaatggt
tcttcatcacaagcatcaatttgtggctctacgttagcattaatggatgctggtgtacca
attaaagcaccagtagcaggtattgcaatgggcttagtaacacgcgatgatagttataca
atcttaactgatattcaaggtatggaagatgcattaggtgatatggactttaaagttgcc
ggaacatctgaaggtattactgctattcaaatggatatcaaaattgatggtttaacaaaa
gaaattattaaagaagctttagagcaagcacgcgtaggtcgtcttgcaattctagatcat
atgttacaaacaattgatacaccgcgtaacgaattaagcgcatttgcgccaaaagtggta
actatgacaattaaacctgaaaaaattagagatgtaattggaccaggtggtaaaaaaatc
aatgaaattattgatgaaactggcgttaaattagacatcgagcaagatggtacaatattt
attggtgccgttgataagaatgcaatagatcaagcgcgtaaaattatagaagatatcacg
cgtgaagcagaggttggccaagtatacgaaggaaaagtaaaacgtattgagaaatacggc
gctttcgttgaattgttcccaggtaaagatgcgctcgttcacatttcacaaattgctaat
gaacgcattgaaaaagtagaagatgtgttgaaagttggagacacatttaaaataaaagta
actgaaattgataaacaaggacgcgttaatgcatcacacaaagtcttgttgtaa
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