Staphylococcus xylosus SMQ-121: SXYLSMQ121_1533
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Entry
SXYLSMQ121_1533 CDS
T03311
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxl03016
]
SXYLSMQ121_1533
Enzymes [BR:
sxl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SXYLSMQ121_1533
Transfer RNA biogenesis [BR:
sxl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SXYLSMQ121_1533
Prokaryotic type
SXYLSMQ121_1533
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AID42964
LinkDB
All DBs
Position
complement(1661366..1662283)
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AA seq
305 aa
AA seq
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MYNGILPVFKDRGLTSHDVVFKLRKILKTKKVGHTGTLDPEVSGVLPICIGAATKVSDYI
MEMGKTYEATVCIGSATTTEDQTGDVIEEKDILDGEITTGHVDTILKQFEGVITQIPPMY
SSVKVNGKKLYEYARNNEEVERPKRQVNVHTIKRTSELRFDDKNCQFDIIVECGKGTYIR
TLATDIGRALQLPAHMSKLTRTQSGGFDIEDSLTLNDVAELHEHESLQDKLFPIEYGLKG
LPQIIISEENIKSKILNGQKFEKAMFKQNIDDMVTMVDEKTQKVLAIYEPHPEKKDEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggtatattacctgtgtttaaagatcgtggattgacaagtcatgatgtggtt
tttaagttaagaaaaatattaaagactaaaaaagtaggacacactggaacattagatcct
gaagtttctggtgtgttaccaatatgtataggagctgctacaaaagttagtgattacata
atggaaatgggtaaaacttatgaagcaacagtttgcataggtagtgcaaccactactgaa
gaccaaactggcgatgtgatagaagagaaagatatattagatggtgaaattactacagga
catgttgatacaatacttaaacaatttgaaggtgttattacacaaataccaccaatgtat
tcatcagtaaaagttaatggcaaaaaattatatgaatatgctagaaataacgaggaagtt
gaacgacctaaacgtcaggtgaatgtacatacaatcaaacgtacatctgaactacgtttt
gacgacaaaaactgccaatttgatataattgtagaatgtggtaaaggtacatatattcgc
acacttgcaacagatataggcagagcattacaattacctgcgcatatgtcaaaattaaca
cgtacacagagtggtggatttgacattgaggacagtttaactttaaatgatgtagcagaa
ttacatgagcatgaatcattacaagacaaactatttcctatagaatatggtttgaaaggt
ttaccacaaattataatttcagaagaaaatattaagtctaaaattttgaacggtcaaaaa
tttgaaaaagcaatgttcaagcaaaatatagacgatatggttacaatggtagatgagaaa
acacaaaaagtgttagcaatttatgaacctcatccagagaaaaaagatgaaattaaacct
aaaaaggtgtttaactaa
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