Staphylococcus xylosus SMQ-121: SXYLSMQ121_1556
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Entry
SXYLSMQ121_1556 CDS
T03311
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxl03032
]
SXYLSMQ121_1556
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_1556
Enzymes [BR:
sxl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SXYLSMQ121_1556
DNA replication proteins [BR:
sxl03032
]
Prokaryotic type
DNA Topoisomerases
SXYLSMQ121_1556
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SXYLSMQ121_1556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_2
Toprim_4
Auto_anti-p27
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
AID42987
UniProt:
A0A5R9B4U6
LinkDB
All DBs
Position
complement(1689657..1691723)
Genome browser
AA seq
688 aa
AA seq
DB search
MAENLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDAENDYEPKYITIRGK
GPVVKELKKHAKKAKKVFLASDPDREGEAIAWHLANILNLEDSKENRVVFNEITKDAVKD
SFKHPRGIEMELVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWKIEGEFRYKKSKFTAKFLHLKNKPYKLTNKDDVEKVTTQLDGDQFEVTK
VTKKEKTRYPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKKQGTVGLITYMR
TDSTRISDQAKAEAKNYIEETYGQNYTSGRKAKGQGAQDAHEAVRPSSTLRTPNEMKAFL
TRDQHRLYKLIWERFVASQMAPAILDTVAMDITQNDIKFRANGQTIKFKGFMTLYVEAKD
DSDEGKDNKLPNIEEGEMVTATDIEPSQHFTQPPPRYTEARLVKTMEELKIGRPSTYAPT
IDTIQKRNYVKNESKRFVPTELGEIVHEQVKDYFPEIIDVDFTVNMETLLDKVADGEIPW
KKVIRDFYSSFSQDVERAEEEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNFP
DCRNTKAIVKTIGVTCPKCKEGDVVERKSKKNRVFYGCSKYPECDFVTWDKPIGRDCPKC
EQYLVEKKQGRKSQVVCSNCDYKEEEQK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaaatttagtcatagttgaatcgcctgcaaaagctaaaactattgaaaaatat
ttagggaaaaaatacaaagttatcgcatcgatggggcatgttcgagatttgcctcgtagt
caaatgggcgtagatgcagaaaatgattatgaacccaaatatattacaatacgcggcaaa
gggccagtagttaaagaattaaagaaacatgctaagaaagccaaaaaagttttcctagcg
agtgacccggaccgtgaaggtgaagctattgcttggcatttagcaaatatattaaattta
gaagattcaaaagaaaatagagtagtatttaatgaaataacaaaagatgctgtgaaagat
agcttcaaacatccaagaggtatagagatggaacttgttgatgcacaacaagcacgtcgt
atattagatcgtttagtaggttataatatttcaccagtactttggaaaaaagtaaaaaaa
gggttatcagccggtcgtgtacaatcagtggcactgagacttgtcattgatcgagaaaat
gaaataagaaacttcaagccagaagaatactggaaaattgagggcgaatttagatataaa
aaatctaaatttacagctaaatttttacatttaaaaaacaaaccatataagttaacaaac
aaagatgatgttgaaaaagtaacgacacagttggacggagatcaatttgaagtaacgaaa
gtaacgaagaaagaaaaaacacgttatcctgcaaatccttttacaacttcaacgctacaa
caagaagctgcgcgtaagttaaactttaaagcgcgtaaaacaatgatgttagcacaacaa
ttatatgaaggtattgacttgaaaaaacaaggcactgttggtttaattacctatatgcgt
actgattcaacgagaatatctgatcaagctaaggcagaagctaaaaactatattgaagag
acgtatggtcaaaattatacttcaggtcgcaaagcaaaaggtcaaggagctcaagatgct
cacgaagcagtcagaccttcaagtactttacgtacaccaaatgaaatgaaagcattttta
actagagatcaacatagattatataaactaatttgggagcgttttgtagcaagtcaaatg
gcacctgcaatattagatacggttgccatggatataacgcaaaatgatataaaattccgt
gcaaatggtcaaacgatcaaattcaaaggttttatgacattatatgttgaagctaaagat
gatagcgatgagggtaaagataataaattacctaatattgaagaaggtgaaatggttaca
gctacagatattgaaccatcacaacatttcactcagccaccaccacgttatactgaagct
cgtctagttaaaacgatggaagagttaaagattgggagaccttctacttatgcaccaact
attgatacaatacaaaaaagaaattatgtaaaaaatgaaagtaaacgttttgtaccaaca
gagttaggcgaaattgtacacgaacaagtaaaagattacttcccagaaatcatagatgtt
gatttcacagtaaatatggaaacgttacttgataaagtggctgatggtgaaattccatgg
aaaaaggtaataagagacttttacagtagtttcagtcaagatgttgagcgtgctgaagag
gaaatggaaaaaattgaaatcaaagatgaaccagctggtgaagactgtgaagtatgtggt
tcgccaatggtcattaaaatgggacgttatggtaaatttatggcgtgctcaaatttcccg
gattgccgcaatacaaaagccattgttaaaacaatcggcgtaacttgtccaaaatgtaaa
gagggcgacgtcgtagaacgtaagtcgaagaaaaatcgtgtgttctatggttgttcaaaa
tatccagaatgtgatttcgttacatgggataaaccaataggtcgagactgtccgaaatgt
gaacaatatcttgttgagaaaaaacaaggacgtaagagccaagttgtatgttctaactgt
gattacaaagaagaagaacagaaataa
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