Staphylococcus xylosus SMQ-121: SXYLSMQ121_1807
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Entry
SXYLSMQ121_1807 CDS
T03311
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sxl
Staphylococcus xylosus SMQ-121
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_1807
Enzymes [BR:
sxl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SXYLSMQ121_1807
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SXYLSMQ121_1807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AID43238
LinkDB
All DBs
Position
complement(1971180..1974647)
Genome browser
AA seq
1155 aa
AA seq
DB search
MELNAYIGRAGTGKSKTIIEEIKTAMREDPLGDPIVLIAPTQNTFQLEQSFVSDESLNGS
LRTEVLHFERLSYRVFQEVGGLIEQQLSKAGTEMMIYDIIQQHQSELKLYRSQVKYYGFS
EKLYEQIQDFKKYAVTPQQLSDYISENDLQTRTKHKLQDIALVYKHLEDRIDGTYVSTED
SLQRFITMMDQSEWLKRAEIYIDGFHNFSTLEYQIIRSLVKYAKKVTVVLTTDGDKDMFS
LFRKPSESLTHIEEIANDLNIQLHTKRFDEVYRFDNADLANLERNFNALQFEPTVANGDI
AILEASGIREEINEVARRILRETREKGYRFQDIAILYRDEAYAYLMESILPQFGIPYNID
VKPSMTHHPIMEMIRSLIEVIQTNWNFDPLMRLFKTDILSKKFKDSNYLIDILENFVLER
GIYGKRWLDEKYFDIEQFRKMGLKRQPLSDEERETFERVIQMKTDVINKVMLFEESMNRA
TTAIEFATAFYESMEAFDLPSQLMTERDTLDFNGQHRAAEEIDQIWHGFIQTLDDLVTVF
GEQTMSKSRFLELFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKQHVYLVGANDGVIP
QTVSSSSLITDDEKKYFQEQSSIELSPTADILQMDEAFVCYIAMTRSCKQVTFSYSLMGS
SGDQKEPSPFINQIQQLFTNLEIQNINHQHQAQPLTLMEHPHQTKIALFESLKAWLDDEI
VAETWLDTYQVMRDDESLNDGLDYLLTALTYDNETVQLNESLSKELYGSTINASVSRFEG
YQACPFKHFASHGLRLNERTKYKLENFDLGDIFHQVLKFISEKVNGDFKNLDPKKIHKLT
VEALSEILPEVQFNLLNSTAYYRYLSQRIGAIVETTLTALKYQGNYTKFTPQRFEAGFRR
KPRDNSELLAEPLHTKQGIPINIRGQIDRIDTYKNGEESFVNIIDYKSSKYSGTLDLTKV
YYGMQMQMMTYMDIVLQNKSRLGLTELTKPGGLLYFHVHEPRIKLAWNQLSEEKRDSEFI
QSFKLSGLLNSDESVLDAFDTRLEPSYNSDIVPLGMKKDGGIKSNSKVADEDTIYKLIHH
NKQNFIETASNIMDGHTEVAPMKYNQTLPCDFCSYKSVCHVDGMIDSKRYRTVDESIDPL
EAVQNVVLESEDDGE
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatgcttatattggcagagcaggcacaggtaaatcgaaaacaataattgaa
gaaattaaaacagcaatgcgagaagatccattaggcgatcctattgtcttaattgcgcct
acacaaaatacttttcagcttgaacaatcattcgtaagcgatgaatcattaaatggtagt
ttgagaacagaagttttacactttgaaagattaagttatcgtgtgttccaagaagttggt
ggtttgatagaacaacaattatctaaagcaggcactgaaatgatgatttatgacatcata
caacaacatcaatcagaattgaagctatatcgttctcaagttaagtattatggattcagt
gaaaagctctatgaacaaattcaagattttaaaaaatatgcagtaacgcctcaacaatta
agtgattatatttcagaaaatgacttacaaacaagaacaaagcataaattacaagatatt
gctttagtttataaacatttagaagatagaattgacggcacatatgtatccactgaagat
agtttacaaagattcattacgatgatggatcaatctgaatggttaaagcgagcggaaatt
tatattgatggctttcataacttctcgacattagaatatcaaattatccgtagtttggtt
aaatacgctaaaaaagttacggtcgtattaacaactgatggcgataaagatatgtttagt
ttatttagaaaaccttcggaatcactaacacacatagaagaaattgcgaacgatctcaat
atacaattacatacgaagcgttttgatgaagtatatcgctttgataatgctgacctagcc
aacctagaacgtaattttaatgcattacaatttgagcctacagttgcaaatggcgatata
gcaattttagaagcgagtgggattagagaagaaataaatgaagttgctcgccgtatttta
agagaaacacgtgagaaaggctatagatttcaagatatagcaattttatatagagatgaa
gcttatgcctatctcatggaatcaatcttgccacaattcggcataccatataacatcgat
gtgaagccgtcaatgacacatcatcctataatggaaatgataagatcactgattgaagta
atacagaccaattggaattttgatccgcttatgcgactctttaaaacagatattctatcg
aagaaatttaaagatagtaattacttgatagatatattagagaatttcgttctagaacgt
ggtatttatggcaaacgctggttggatgaaaaatattttgatattgaacaatttagaaaa
atggggctaaaacgtcaaccattatcagatgaagaacgcgagacctttgaacgtgttatt
caaatgaaaacagatgttatcaataaagtgatgctatttgaagaaagtatgaaccgtgca
actacagctattgaatttgccactgctttctacgaatcgatggaagcattcgacttacca
agccaattaatgactgaacgtgatacgttagattttaacggtcaacatagagctgctgag
gaaattgaccagatatggcatggctttattcaaacgttggacgacttagttacggtattt
ggtgagcaaacaatgtctaaatcgcgttttctagaattgtttgatattggcctagaacaa
ttagaatttgtgatgattcctcaaacgcttgatcaggtaagtattggtactatggattta
gcaaaagtagacaacaaacaacatgtatatctagtaggagcgaatgatggtgttatacca
caaaccgtttcatcttcaagtttaattacagacgacgagaagaaatatttccaagaacaa
tcctctatagaattaagtcctacagcggatatattgcaaatggatgaagcatttgtatgt
tatatcgcaatgacgcgtagttgtaaacaggttacgttttcgtattcacttatgggttct
agtggggatcaaaaagaaccgagtccatttataaaccaaattcaacaattatttactaat
ctagaaattcaaaatataaatcatcagcatcaagcacaaccacttactttaatggaacat
ccacatcaaactaaaattgctttatttgaatcgttaaaagcttggttagatgatgaaatt
gttgcggaaacttggttagatacatatcaagtgatgcgagacgatgaaagcttaaatgat
ggtttagactacttattaactgccttaacttatgataatgaaacggttcaattaaacgaa
tcattatctaaagaattgtatggttcaacaattaacgcaagtgtttctagatttgagggc
tatcaagcttgtccatttaaacactttgcttcacatggtttacgtttaaatgaacgtaca
aaatacaagttagaaaactttgatttaggagatatcttccatcaagtgttgaaattcatc
tcagaaaaagtaaatggtgattttaagaatttagaccccaaaaaaattcataagctaaca
gttgaagcattaagtgaaatattgcctgaagtccaattcaacttattaaattcaacagcc
tattaccgttatttatctcaacgtattggtgcaattgtagaaacgactttaacggcatta
aaatatcaaggtaattatactaaatttacaccacaacgatttgaagctggttttagaaga
aaaccaagagataatagtgaattattagctgaaccgttgcatacaaaacaaggtatacct
ataaatatacgtggacaaattgataggatagatacgtataaaaatggggaagagagtttt
gtaaatattattgactataagtcatctaaatatagtggtacgttggatttaacaaaagtt
tattacggtatgcaaatgcaaatgatgacatatatggatatcgtacttcaaaataaatca
cgtctaggattaacagagctaactaagcctggtgggctattatactttcatgtacatgaa
ccgcgcattaaattagcatggaatcaattgtcggaagaaaagagagactctgaatttatc
cagtcattcaaattaagcggcttactaaatagtgatgaatcagtattagatgcttttgat
actagactggagccaagttataattctgatattgtacctttaggaatgaaaaaggatggc
ggtattaagagtaatagtaaggttgcagacgaggataccatttacaaattaattcatcat
aataaacaaaactttattgaaacggcatcaaatatcatggatggacatacagaagtggca
ccaatgaaatacaatcagacattaccgtgtgatttttgtagctataaatcagtctgtcat
gtagacggtatgatagatagtaaacgctatcgtacagttgacgaatctattgatccatta
gaagcagtacaaaatgtagttttagaaagtgaggacgatggagaatga
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