Staphylococcus xylosus SMQ-121: SXYLSMQ121_1937
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Entry
SXYLSMQ121_1937 CDS
T03311
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SXYLSMQ121_1937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_1937
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SXYLSMQ121_1937
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SXYLSMQ121_1937
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_33
AAA_16
nSTAND1
AAA_22
DnaJ_CXXCXGXG
nSTAND3
AAA_23
AAA_14
ATPase_2
Viral_helicase1
ATPase
cobW
NACHT
SLFN-g3_helicase
FtsK_SpoIIIE
TBPIP_C
Motif
Other DBs
NCBI-ProteinID:
AID43368
LinkDB
All DBs
Position
complement(2086502..2089336)
Genome browser
AA seq
944 aa
AA seq
DB search
MKQPSIVVKGARAHNLKDVDIEIPKDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARIGRP
FCPNHGIEIESQTVQQMVDQVMKLEERTKIQILAPVITHRKGAHEKLIDDISKKGYVRVR
VDGEITDVNEVPALDKNKNHTIEVVIDRLVVKEDIEARLADSIETALQLSEGSLIVDIID
GEELKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDLDLVVPDADKT
LNEGAIVAWESSSSDYYPTLLNRVCEVFKINMDKPFKKLTDRQKDIILYGSKGKEIEFTF
TQRNGQTRKRTMEFEGVINNINRRYHDSPSELVREMMSKYMTELPCETCHGKRLSREALS
VYIAGHNIGDVVEQSIKEALHSYEHIELSEQDRKIANQILKEINSRLEFLYNVGLEYLTL
NRASGSLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNT
LIVVEHDDDTMRAADFLVDVGPGAGEHGGEIVASGTPKQVMNNKKSLTGQYLSGQKRIEV
PEARRQVTDRKISVKGARSNNLKGIDVDFPLSTMTVVTGVSGSGKSTLVNEVLYKSLAKH
INKSKIKPGDYDEIQGIDQLDRIIDIDQSPIGRTPRSNPATYTGVFDNIRDIFAQTNEAK
VRGYTKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCGGSRYNRETLEVTYKG
KNIADILAMTAEEATMFFENVPKIHRKLKTLVDVGLGYVTLGQPATTLSGGEAQRVKLAS
ELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNKLVENGDTVVIIEHNLDVIKMADHII
DLGPEGGDGGGTLVATGTPEAITEVEESYTGRYLKPVLARDTVK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaccatccattgtagtaaaaggggcacgtgcccataatttaaaagatgttgat
atagaaatacctaaagataaacttatagttatgactggactttcaggttcaggtaaatca
tctttagcatttgatacaatatatgccgaaggacagcgtagatatgttgaatcattaagt
gcatatgcaagacaatttttaggtcaaatggataaaccagacgtagacacgatagaaggt
ttatctccagctatttcaatagatcaaaaaacgacgagtaaaaatccaagatctactgtt
gcaaccgtaacagaaatttatgattatataagattactctatgcgcgtataggaagacca
ttctgccctaatcatggcattgaaatagaatcacaaacagtacaacaaatggttgatcaa
gtcatgaaattagaggaacgtactaagattcaaattctcgcgccagtgattacacataga
aaaggtgctcatgagaaattaattgatgacattagtaaaaaaggttatgtgcgtgtcaga
gtagatggtgaaataactgatgtaaatgaagtacctgcattagataaaaataaaaaccac
actattgaagtagtcattgaccgtttagtagttaaagaagacattgaagcacgtttggca
gactctatcgaaacagcgttgcaactttctgaaggtagtctcattgtagatattattgac
ggcgaagaattaaaattctcagaaaatcatgcttgtcctatttgtggtttctcaattggc
gaattagaaccacgtatgtttagttttaacagtccatttggcgcttgcccaacttgtgat
ggcttaggccaaaaacttactgttgatttagatttagtagttcctgatgctgacaaaacg
ttaaacgaaggtgctattgttgcttgggaatcatctagttctgattattatccaactttg
ttaaaccgtgtttgtgaagtgtttaaaataaatatggacaaaccatttaaaaagcttaca
gatcgacaaaaagatatcattttatatggttcaaaaggtaaagaaattgaatttacattc
acacaacgcaatggccaaactcgcaaacgtacaatggagtttgaaggtgtaatcaataat
ataaatagaagatatcatgattcaccatctgaattggtaagagaaatgatgagtaaatac
atgactgaattgccatgtgaaacttgtcacggtaaacgtttaagtcgtgaagcgctatct
gtttatattgcaggacataacattggtgatgttgttgaacaatctattaaggaagcgttg
catagctatgaacatatagaattatctgaacaagatagaaaaattgcgaaccaaatctta
aaagaaatcaattcaaggttagaattcttatataatgttggactagagtatttaacattg
aatcgcgcgtctggttcgctatctggtggtgaggcacaacgtattcgacttgcgacacag
attggttcaagactttcaggtgtgctttatgtcttagatgaaccttctatcgggttacat
caacgagacaatgaccggttaattaatacgttaaaagaaatgcgtgatttaggtaatact
ttaattgttgttgaacatgatgacgatacaatgcgtgcagcagacttcttagttgatgtt
ggtccaggggccggcgaacacggtggagaaattgttgcgagtggaacaccgaaacaggta
atgaataataagaaatcattaacaggccaatatttaagtggtcaaaaacgtattgaagta
cctgaagcacgtagacaggttacagatcgcaaaattagtgtgaaaggtgcgagaagtaat
aacttgaaaggtatagatgttgattttccactttcaacaatgactgtggtcacaggcgtt
tcgggttctggtaaaagtacattagtgaatgaggtgctttacaaatcattagcaaaacat
atcaacaaatcaaaaataaaacctggtgattacgatgaaattcaaggcatagatcaatta
gatcgtatcattgacattgatcaatctccaattggccgaacgccaagatctaatccagct
acttacacaggggtttttgataatattcgagatatctttgcacagactaatgaagcgaaa
gttagaggttatacgaaaggtcgttttagtttcaatgttaaaggcggtcgttgtgaagcg
tgtaaaggcgacggtattataaaaatagagatgcatttcttacctgatgtgtatgtacct
tgtgaagtgtgtggtggttctagatataatcgtgaaacactagaagtgacatacaaagga
aaaaatattgctgatattttagccatgactgctgaagaagctacgatgttctttgaaaac
gtacctaaaattcatcgcaaattgaaaacgttagtagatgttggtttaggttatgtaact
ttaggccagcctgctacaactttatcgggtggtgaagcgcagcgtgttaaacttgcttca
gaattgcataaacgatctacaggtcgatcaatctatatattagatgagcctacaactggt
ttacatgtggacgacattagtcgtttgttaaaagtgttaaataaacttgtagaaaatggt
gacactgtagttattattgaacataatctagatgtgattaaaatggctgaccatatcata
gacttaggacctgaaggtggcgatggtggtggtacactcgttgctactggtacgcccgaa
gcaattacagaagttgaagagagttatacaggtcgatatttaaaaccagtattagcacgt
gatacggttaaataa
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